PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_011075858.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
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Family | bZIP | ||||||||
Protein Properties | Length: 285aa MW: 32076.1 Da PI: 10.1476 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 31.5 | 3.8e-10 | 41 | 84 | 2 | 45 |
XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 ++ k rr+++NReAAr+sR+RKka++++Le +L++ ++L XP_011075858.1 41 RDQKTLRRLAQNREAARKSRLRKKAYVQQLESSRMKLTQLEQEL 84 567899*************************9888888777655 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 2.4E-8 | 40 | 103 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.461 | 42 | 86 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 2.8E-7 | 42 | 85 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 2.94E-7 | 44 | 87 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 5.7E-8 | 45 | 89 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 47 | 62 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF14144 | 9.3E-12 | 129 | 158 | IPR025422 | Transcription factor TGA like domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0009410 | Biological Process | response to xenobiotic stimulus | ||||
GO:0009627 | Biological Process | systemic acquired resistance | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 285 aa Download sequence Send to blast |
MADASPRTDT STDADTEDKN LRFQNNQLQA IVASDGSDKS RDQKTLRRLA QNREAARKSR 60 LRKKAYVQQL ESSRMKLTQL EQELQRARQQ GIFISSSGDQ SQSIGGNGAL AFDVEYARWL 120 EEHNRRINEL RGMWKTPAER CFLWLGGFRS SELLKLLINQ LEPLTEQQLL AINNLQQSSQ 180 QAEDALSQGM EALQQSLAET LAGSLGPSSS SGNVANYMGQ MAMAMGKLGT LEGFIRQADN 240 LRQQTLQQMH RILTTRQSAR ALLAISDYFS RLRALSSLWL ARPRE |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. Binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00349 | DAP | Transfer from AT3G12250 | Download |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_011075858.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011075851.1 | 0.0 | transcription factor TGA2.2 | ||||
Refseq | XP_011075852.1 | 0.0 | transcription factor TGA2.2 | ||||
Refseq | XP_011075853.1 | 0.0 | transcription factor TGA2.2 | ||||
Refseq | XP_011075855.1 | 0.0 | transcription factor TGA2.2 | ||||
Refseq | XP_011075856.1 | 0.0 | transcription factor TGA2.2 | ||||
Refseq | XP_011075857.1 | 0.0 | transcription factor TGA2.2 | ||||
Refseq | XP_020549248.1 | 0.0 | transcription factor TGA2.2 | ||||
Refseq | XP_020549249.1 | 0.0 | transcription factor TGA2.2 | ||||
Refseq | XP_020549250.1 | 0.0 | transcription factor TGA2.2 | ||||
Refseq | XP_020549251.1 | 0.0 | transcription factor TGA2.2 | ||||
Swissprot | Q41558 | 1e-160 | HBP1C_WHEAT; Transcription factor HBP-1b(c1) (Fragment) | ||||
TrEMBL | A0A068UNV8 | 0.0 | A0A068UNV8_COFCA; Uncharacterized protein | ||||
STRING | Migut.F00128.1.p | 0.0 | (Erythranthe guttata) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G12250.2 | 1e-112 | TGACG motif-binding factor 6 |