PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_011075425.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
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Family | bZIP | ||||||||
Protein Properties | Length: 466aa MW: 51291.3 Da PI: 7.0376 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 32.7 | 1.6e-10 | 182 | 223 | 4 | 45 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 k rr+++NReAAr+sR+RKka++++Le+ +L++ ++L XP_011075425.1 182 QKTLRRLAQNREAARKSRLRKKAYVQQLENSRLKLTQLEQEL 223 6889*************************9877777766555 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 2.9E-8 | 172 | 226 | No hit | No description |
SMART | SM00338 | 2.7E-11 | 179 | 242 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.438 | 181 | 225 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14708 | 3.60E-23 | 183 | 235 | No hit | No description |
Pfam | PF00170 | 2.7E-7 | 183 | 223 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.04E-6 | 183 | 226 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 186 | 201 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF14144 | 5.4E-32 | 265 | 340 | IPR025422 | Transcription factor TGA like domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 466 aa Download sequence Send to blast |
MGSTTIKFGG EDNIGVNPGM PSFISQTPVT NPMGTEANTT QSSRISDFGV LEQYLGFQIG 60 ETANTGRSPV FNPTVNSQSM APDLQSGAFN KNHASNNMSF SPALLGSQAT QLQKRPQPNL 120 ISMSGAQHEN WGESNMADSS SRTDTSTDVD PDDRNQKFEM GQSAVVAVSD SSDKSKDKTP 180 DQKTLRRLAQ NREAARKSRL RKKAYVQQLE NSRLKLTQLE QELQRARQQG IFISSMGDQS 240 HAGSANGALA FDAEYARWLE DQNRQINELR AAVNSHASDT ELLAIVDNVT THFSDIFRLK 300 GNAAKADVFH ILSGMWKTPA ERCFMWIGGF RPSELLKLLV NQLEPLTEQQ LTGIYNLQQS 360 SHQAEDALSQ GMDALQQSLA ETLASGGSEG SAANVGNYMG QMAMAMGKLG TLDGFLRQAD 420 NLRQQTLQQM HRILTTRQSA RALLLIHDYF SRLRALSSLW LARPRE |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_011075425.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011075425.1 | 0.0 | transcription factor TGA2.3 isoform X1 | ||||
Swissprot | O24160 | 0.0 | TGA21_TOBAC; TGACG-sequence-specific DNA-binding protein TGA-2.1 | ||||
TrEMBL | A0A4D9A443 | 0.0 | A0A4D9A443_SALSN; Transcription factor TGA | ||||
STRING | Migut.J01654.1.p | 0.0 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA820 | 23 | 85 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G06950.4 | 1e-139 | bZIP family protein |