PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011075159.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family G2-like
Protein Properties Length: 411aa    MW: 45672 Da    PI: 6.5114
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011075159.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like98.93.4e-31235289155
         G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                     k+r+rWt++LH+rFve+v++LGG++k tPk+il+lm+ +gLt+ hvkSHLQkYR 
  XP_011075159.1 235 KTRIRWTQDLHDRFVECVNRLGGPDKSTPKAILKLMDTEGLTIFHVKSHLQKYRN 289
                     68****************************************************6 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129410.183232292IPR017930Myb domain
Gene3DG3DSA:1.10.10.605.9E-28233290IPR009057Homeodomain-like
SuperFamilySSF466892.51E-16233289IPR009057Homeodomain-like
TIGRFAMsTIGR015578.4E-24235290IPR006447Myb domain, plants
PfamPF002491.8E-8239288IPR001005SANT/Myb domain
PfamPF143791.8E-19320366IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 411 aa     Download sequence    Send to blast
MKGMHQNFGF AGDFTSEFSD YLPQSYGIQQ QSAPMGFHSQ PVAAGNALQQ PNSWPGHSSS  60
SIISRIGSPA SAFYATELYM GLSQCDFQEN SSTCCSQQFK NSYQRIPSFQ QPGSGFCGDS  120
LPRTQPDFQT KNGLSPAVRT QTPNSQYIRP EKSPFSNLSE SEQLLYLKNK LLGDLDDSNS  180
RSPSIPFDAH PDVEVSQNIY AADFGQTKAS GRQPVCLSTT PGNNSASPAA VPSSKTRIRW  240
TQDLHDRFVE CVNRLGGPDK STPKAILKLM DTEGLTIFHV KSHLQKYRNA KYIPESVEGK  300
SDKKNSTNNA AQIDIKTGLQ LKEALQLQLD VQMRLHEQLE IQKKLQIRIE EQGKQLQMMF  360
DQQQKTTQIL VESRNTDNKC TPNNLSTTLE DPEVLILDGS DDDMVFPSKI S
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A1e-22235292259Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B1e-22235292259Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A1e-22235292158Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B1e-22235292158Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C1e-22235292158Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D1e-22235292158Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A1e-22235292259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C1e-22235292259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D1e-22235292259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F1e-22235292259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H1e-22235292259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J1e-22235292259Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011075159.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011075159.10.0myb family transcription factor PHL5 isoform X1
TrEMBLA0A2G9H6R60.0A0A2G9H6R6_9LAMI; Uncharacterized protein
STRINGMigut.J01825.1.p1e-130(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA24912458
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06800.15e-67G2-like family protein