PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011074672.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family C2H2
Protein Properties Length: 442aa    MW: 48034.3 Da    PI: 9.7764
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011074672.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H216.23e-05207229223
                     EETTTTEEESSHHHHHHHHHH.T CS
         zf-C2H2   2 kCpdCgksFsrksnLkrHirt.H 23 
                      Cp Cg++F+  ++L++H+   H
  XP_011074672.1 207 ACPECGEVFPKIESLEHHQAIrH 229
                     6******************9877 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE patternPS000280206229IPR007087Zinc finger, C2H2
PROSITE profilePS501579.016206234IPR007087Zinc finger, C2H2
SuperFamilySSF563991.53E-22231438No hitNo description
Gene3DG3DSA:3.90.228.104.7E-11232438IPR012317Poly(ADP-ribose) polymerase, catalytic domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003950Molecular FunctionNAD+ ADP-ribosyltransferase activity
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 442 aa     Download sequence    Send to blast
MRERSTSNKS SAPPLPAFFV FHLLASLIFM ALLTFLPADP NNNNSNSHDS KSKKSKKKQQ  60
QTKQKQPSSS SWDQIKNLLT CKQVQDSKIH DPSKTHTLFH SSSCSSICTF RDVVHANTRV  120
VHRSADNSPE GSTVGQDTNR LLTKKTTHAS SSSRSIHSSS SVRSTAGAGR GMQLRKLSGC  180
YECHAIVDPA RDGTGCRYPL GRSSICACPE CGEVFPKIES LEHHQAIRHA VSELGPEDSS  240
RNIVEIIFKS SWLKKDNPIC KIERILKVHN TRRTIQRFED YRDAVKIRAN SSAKRNARCA  300
ADGNELLRFH AATLTCSLGA RGSSSLCGSI PACGVCTIIR HGFQGSKISG VRTTASSGRA  360
HDCLGGSGTR RAMLVCRVIA GRVKRVAEDS AADEDGNAAP AAGSYDSLAS YAGVYSNLEE  420
LYVFSSRAIL PCFVVIYKAL ES
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011074672.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011074672.10.0uncharacterized protein LOC105159339 isoform X1
TrEMBLA0A2G9GUH10.0A0A2G9GUH1_9LAMI; Uncharacterized protein
STRINGMigut.C00823.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA51952334
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75710.11e-150C2H2-like zinc finger protein