PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_011074583.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
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Family | bZIP | ||||||||
Protein Properties | Length: 144aa MW: 16819.2 Da PI: 10.3892 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 40.8 | 4.8e-13 | 55 | 107 | 5 | 57 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 ++ rr+ +NRe+ArrsR RKk+ +e+L+ ++ L +eN++Lk++l ++ + XP_011074583.1 55 RKRRRMVSNRESARRSRWRKKKHLENLTSEANRLNKENRELKNRLCMIAHDCH 107 67899**************************************9998888776 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 2.0E-8 | 51 | 115 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 5.2E-9 | 53 | 104 | No hit | No description |
PROSITE profile | PS50217 | 10.783 | 53 | 99 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.0E-10 | 55 | 105 | No hit | No description |
Pfam | PF00170 | 1.5E-10 | 55 | 106 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14702 | 1.35E-15 | 56 | 107 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 58 | 73 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 144 aa Download sequence Send to blast |
MMSTANPVHY PLPVLEHSLS PNEINDLFSM IQSQPSIHST SSSETNRSLY SLEERKRRRM 60 VSNRESARRS RWRKKKHLEN LTSEANRLNK ENRELKNRLC MIAHDCHLVQ RDSNRLLCES 120 FYLQQKLSGL NQMLASAMQL PPLS |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 54 | 58 | RKRRR |
2 | 56 | 75 | RRRMVSNRESARRSRWRKKK |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_011074583.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_028065855.1 | 2e-46 | basic leucine zipper 4-like | ||||
TrEMBL | A0A2G9HUA3 | 6e-66 | A0A2G9HUA3_9LAMI; Uncharacterized protein | ||||
STRING | PGSC0003DMT400012575 | 3e-42 | (Solanum tuberosum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA2820 | 22 | 51 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G22850.2 | 1e-19 | basic leucine-zipper 6 |