PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011074572.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family bHLH
Protein Properties Length: 320aa    MW: 34780.3 Da    PI: 8.7184
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011074572.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH13.20.000172162531254
                     HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     R +++ ++++ L++l+ +      +K + a++L +A+ YIk L
  XP_011074572.1 216 RKEKLGDRIAALQQLVAPF-----GKTDTASVLMEAIGYIKFL 253
                     7788899*********998.....8****************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088811.293204253IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.7E-10214266IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000835.59E-5214258No hitNo description
Gene3DG3DSA:4.10.280.107.8E-8218261IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 320 aa     Download sequence    Send to blast
MAPNHWGAPN TAGLSLTTTC HSSPQQDLQL SRIKQVFSDH YHHLNYTQLL GSSLNPSSIT  60
HHQFSLMTNQ LTNLQSDDIR TKFLLKPFSS AQLSPGDLPF SSPTGFSQIF PGANLSDFNQ  120
ETIPGSLDIL NLQAVDHLRS SSRFSGNFTP ASYGLDHDMH QPYQIPLQSS NKMSSDGAAE  180
AKRSSCSKLM EAKTLQTAPK KSRVEARASC PPFKVRKEKL GDRIAALQQL VAPFGKTDTA  240
SVLMEAIGYI KFLHTQVQTL SLPYLKNTST GTHTTTIIKA QGGDGKESEE AKRELRSGGL  300
CLVPLSCITD GGGAVIWPPN
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011074572.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011074572.10.0transcription factor bHLH110 isoform X1
TrEMBLA0A2G9HVM57e-80A0A2G9HVM5_9LAMI; Uncharacterized protein
STRINGVIT_18s0001g12970.t017e-68(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27660.13e-48bHLH family protein