PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011074088.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family Nin-like
Protein Properties Length: 928aa    MW: 102595 Da    PI: 6.6203
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011074088.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK91.18.8e-29606656252
          RWP-RK   2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 
                     ek+i+l++l+++F++++kdAA++Lgvc+T+LKriCRq+GI+RWP+Rkik++
  XP_011074088.1 606 EKTITLQVLRQHFAGSLKDAARNLGVCPTTLKRICRQHGIQRWPSRKIKKV 656
                     799**********************************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5151917.257595676IPR003035RWP-RK domain
PfamPF020421.0E-25608656IPR003035RWP-RK domain
SuperFamilySSF542772.45E-23822908No hitNo description
Gene3DG3DSA:3.10.20.2406.7E-23827907No hitNo description
PROSITE profilePS5174525.146828911IPR000270PB1 domain
SMARTSM006662.3E-26828911IPR000270PB1 domain
PfamPF005641.5E-19829906IPR000270PB1 domain
CDDcd064078.25E-41830907No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 928 aa     Download sequence    Send to blast
MEEGVLPLST VLGTPSDTFM DLDYMDELLM EGCWLEANGS EFSQFDCSTP ISPFEPSFAW  60
PVPVLEANNG ESGGSPSKDG HEERQRSSFP ENLSISQSQG PQHYKKPVSH VENICNAFGS  120
SAQSENYLLE VSELTKRWWI GPRASTPVMD RLIQALGYIK DRSRDKDVLI QVWVPVIRGG  180
KRVLTTSNQP FSLEVNCPRL AHYREISVNF QFPAEEDSKE VVGLPGRVFR SKVPEWTPDV  240
RFFTRDEYPR VGHAQQYDVR GTLAVPVLEQ GSRSCLGVIE VVLTTQKIQY RPELESVCKA  300
LEAVDLRIAE VSSTQNVKTT DLSYQAALPE ILEVLRSACG THGLPLAQTW VQCTLQGNGG  360
CRHSDENLRN CVSPVDSACY IGDSRIQGFH DACSEYHLLK GQGIVGRAFR TNQPCFSPDI  420
TAYNKTEYPL SHHARMFGLK AAVAIRLRSI CTGSADFVLE FFLPMNCKDP EEQKKLLTSL  480
STIIQNVCRT LRVVSEKELL EESGLADEAA NTPVMSISKE VHKVDHAQFL QPFPSQVNHQ  540
ESGSAVSPFQ NGKSGEVLAE SSDVRLAQPD SNPREGVTFD TNTSTSGDGS SLYTNKTGEK  600
RRIKGEKTIT LQVLRQHFAG SLKDAARNLG VCPTTLKRIC RQHGIQRWPS RKIKKVGHSL  660
QKIQRVIDSV QGASGVLQIE SFYSNFPELA SPNASRTTPF SHSKSTDNLR PLEGQLESSV  720
LRPPAAASVS PSSSGSQSSS SSQCCSSGAQ PNSYSTSVAG VEDPVVKEEP DNSMFKRTKS  780
DANLHFSSDG PKLLPRSQSH VSFCWPDKPG NPPLAAEGGS QKPQQGDPPR IKVTYGEDTI  840
RFRMQNNWKY KDLLQEISRR FGVENSSGFH LKYLDDDAEW VLLTCDADLE ECIDVCRSSR  900
SQTIKLSFLS GSQTQFGRSS GFRYPLSL
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011074088.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG9754432e-34HG975443.1 Solanum pennellii chromosome ch04, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011074088.10.0protein NLP5-like
RefseqXP_011074089.10.0protein NLP5-like
RefseqXP_020548089.10.0protein NLP5-like
RefseqXP_020548090.10.0protein NLP5-like
TrEMBLA0A2G9FXJ20.0A0A2G9FXJ2_9LAMI; Uncharacterized protein
STRINGMigut.N02963.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA15982467
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G76350.10.0Nin-like family protein