PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011073882.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family bZIP
Protein Properties Length: 421aa    MW: 46237.2 Da    PI: 6.6641
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011073882.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_127.47.4e-09230288563
                     CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                     kr++r   NR +A rs +RK  +i+eLe+k ++L++e ++L  +   l+     l+se+
  XP_011073882.1 230 KRAKRIWANRQSAARSKERKMRYIAELERKLQSLQTEATSLSAQFTLLQRDTNGLTSEN 288
                     9******************************************9999999988888887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003386.0E-14226290IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.622228291IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1708.8E-8230291No hitNo description
SuperFamilySSF579594.71E-10230281No hitNo description
PfamPF001702.4E-7230288IPR004827Basic-leucine zipper domain
CDDcd147031.55E-23231280No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 421 aa     Download sequence    Send to blast
MDKEKIHYGT GSLLPPPGRY SAFSPPNSSY NMKSELSGSS NLPPVGAGSS SEQGHFGHGM  60
SDSSRFSHDI SQMPDTPPKN LGHRRAHSEI LTLPDDISFD SDLGVVGGLD GPSFSDETED  120
DPLSTYIDMD KFDSTTGLSE FQVGDSSTLA AKQGSSSTPA IESSNPSSDN VATASNEKPR  180
IRHQHSQSMD GSTTIKPEML MSGSEGPSPA ETKKAISAAK LAELALIDPK RAKRIWANRQ  240
SAARSKERKM RYIAELERKL QSLQTEATSL SAQFTLLQRD TNGLTSENSE LKLQLQTMEQ  300
QVQLQVALND SLKEEIQHLK VLTGQTIPNG GPMMSIPTSY GSNQQYYPNN HTVNTLLTAQ  360
KLQQLQLHSQ KQHHQFHQHH LHPFQQKQLQ QPQSKSSVQE QEQQLQQTGD VKLRSSLPSS  420
I
Functional Description ? help Back to Top
Source Description
UniProtPutative transcription factor with an activatory role.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011073882.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011073882.10.0probable transcription factor PosF21
RefseqXP_020547969.10.0probable transcription factor PosF21
RefseqXP_020547970.10.0probable transcription factor PosF21
RefseqXP_020547971.10.0probable transcription factor PosF21
SwissprotQ040881e-136POF21_ARATH; Probable transcription factor PosF21
TrEMBLA0A2G9GFX20.0A0A2G9GFX2_9LAMI; Uncharacterized protein
STRINGEMJ235790.0(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA39652137
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G06070.11e-129bZIP family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Xu C, et al.
    Control of auxin-induced callus formation by bZIP59-LBD complex in Arabidopsis regeneration.
    Nat Plants, 2018. 4(2): p. 108-115
    [PMID:29358751]