PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011073782.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family ERF
Protein Properties Length: 347aa    MW: 38378.4 Da    PI: 9.5194
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011073782.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.91.1e-17190237455
             AP2   4 kGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +GVr+++ +g+WvAeIr p++   r+r++lg+f+tae+Aa a++ a+  l+g
  XP_011073782.1 190 RGVRQRH-WGKWVAEIRLPRN---RTRVWLGTFDTAEDAAFAYDTAAYILRG 237
                     9*****9.**********955...5**********************99987 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003803.8E-32188251IPR001471AP2/ERF domain
PROSITE profilePS5103221.522188245IPR001471AP2/ERF domain
PRINTSPR003671.7E-9189200IPR001471AP2/ERF domain
SuperFamilySSF541711.11E-21189246IPR016177DNA-binding domain
PfamPF008471.8E-10190236IPR001471AP2/ERF domain
CDDcd000181.75E-29190247No hitNo description
Gene3DG3DSA:3.30.730.105.1E-30190246IPR001471AP2/ERF domain
PRINTSPR003671.7E-9211227IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 347 aa     Download sequence    Send to blast
MADKFPKAET LTQEKELSSC PEGMGVFHPP PNILGCLNST STVNDVVPAT TMIKKQLLPQ  60
HTNSMPGFIN HDAPMSFLEF SNPSPSLYSR FSALTRAEDP FHCSKADHSN SGNPLSSMPQ  120
LLEQNQLNKL NHTLTNQYPS KGFVTMSTHH DHCLSTTKTR QMKLSGRRSC NHNSPQKSPS  180
SYSSQGKLSR GVRQRHWGKW VAEIRLPRNR TRVWLGTFDT AEDAAFAYDT AAYILRGDYA  240
HLNFPHLKHQ IKASSMSNNT AALLDAKLKA ISQGIVAQKK VADSKSSSSE PKSLSPKTAK  300
KEWGLEVSHE MKKSSEGTLV SDADAVQLSR MPSLDMDVIW DALLVSD
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A9e-21184245163ATERF1
3gcc_A9e-21184245163ATERF1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011073782.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011073782.10.0ethylene-responsive transcription factor ERF062-like
TrEMBLA0A061EJU15e-86A0A061EJU1_THECC; AP2/ERF domain-containing transcription factor, putative
STRINGEOY052859e-87(Theobroma cacao)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA109211825
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13620.19e-44ERF family protein