PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011073756.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family ERF
Protein Properties Length: 297aa    MW: 32315.2 Da    PI: 9.3369
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011073756.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.61.5e-18105155256
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                      y+GVr+++ +g+WvAeIr p +   r r++lg++ tae Aa a+++a+ kl+ge
  XP_011073756.1 105 LYRGVRQRH-WGKWVAEIRLPQN---RIRVWLGTYETAEAAAYAYDRAAYKLRGE 155
                     59******9.**********954...5**************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000188.76E-15104164No hitNo description
SuperFamilySSF541712.94E-22105163IPR016177DNA-binding domain
PROSITE profilePS5103223.143105162IPR001471AP2/ERF domain
SMARTSM003803.1E-35105168IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.3E-30105163IPR001471AP2/ERF domain
PfamPF008471.2E-12106155IPR001471AP2/ERF domain
PRINTSPR003675.4E-10106117IPR001471AP2/ERF domain
PRINTSPR003675.4E-10128144IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 297 aa     Download sequence    Send to blast
MARIQEPAAF NAGNASHIGL SLSQLILSSN SNTLDTIFSH CEQSGPETGP FSEPLGSSVY  60
LRQRDLVHQF SGGNGGSPSI LPRASSFTSP IHGPGPFFSP SKTKLYRGVR QRHWGKWVAE  120
IRLPQNRIRV WLGTYETAEA AAYAYDRAAY KLRGEYARLN FPNLRDPARL GLGDGARLDA  180
LKNAVDAKIQ AIWQKVKREK KARRAPKKSQ GKSNSNSNSD SKAAVKTADS SVSSVVNAES  240
LSGSVSEDEF WRGGGSVSNE WCPAAEVVGE MEMEMDGCSL ARVPSFDPDL IWEVLAN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A7e-20101162163ATERF1
3gcc_A7e-20101162163ATERF1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011073756.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011073756.10.0ethylene-responsive transcription factor ERF061-like
SwissprotQ9C7W24e-63ERF61_ARATH; Ethylene-responsive transcription factor ERF061
TrEMBLA0A2G9HU091e-112A0A2G9HU09_9LAMI; Uncharacterized protein
STRINGMigut.A00662.1.p1e-105(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA36012345
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G64380.13e-41ERF family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]