PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011072587.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family ARR-B
Protein Properties Length: 467aa    MW: 52253.7 Da    PI: 6.4701
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011072587.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like71.41.4e-22220268554
         G2-like   5 rWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYR 54 
                     +Wt+eLHe+F+eaveqL G+ +  Pk+ilelm+v+gLt+ +v+SHLQk R
  XP_011072587.1 220 EWTQELHEKFMEAVEQL-GEGRCFPKEILELMNVPGLTRMQVASHLQKCR 268
                     7****************.9*****************************98 PP
2Response_reg47.21.2e-16231281107
                     EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS
    Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 
                     vl+vd +   ++++ + le  +y +v+ ++ +++a+++l + +  +Dl++  i+ p+++G++ll++  + +  +p+++++  ++   a +a++ G
  XP_011072587.1  23 VLLVDHDSEGLMNIGNQLEACHY-RVTLVELASSAITMLLNGKvkFDLVMANINSPDLHGFKLLQQAVNMD--IPVVLMSVDDNVFIAMRAIENG 114
                     89*********************.***************998888********************988755..********************** PP

                     ESEEEESS--HHHH CS
    Response_reg  94 akdflsKpfdpeel 107
                     a  f+ Kp+++e l
  XP_011072587.1 115 AFLFIKKPTSMEVL 128
                     ********998876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF521729.53E-2018142IPR011006CheY-like superfamily
Gene3DG3DSA:3.40.50.23008.9E-2220149No hitNo description
SMARTSM004482.5E-1121132IPR001789Signal transduction response regulator, receiver domain
PROSITE profilePS5011028.53622136IPR001789Signal transduction response regulator, receiver domain
PfamPF000721.8E-1123128IPR001789Signal transduction response regulator, receiver domain
CDDcd001566.74E-1524136No hitNo description
PROSITE profilePS5129413.29211272IPR017930Myb domain
SuperFamilySSF466891.85E-16215268IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.608.4E-22216269IPR009057Homeodomain-like
TIGRFAMsTIGR015571.1E-19219269IPR006447Myb domain, plants
PfamPF002499.3E-9220267IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000160Biological Processphosphorelay signal transduction system
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 467 aa     Download sequence    Send to blast
MWDLGNLSAP TASYLTVMHE IHVLLVDHDS EGLMNIGNQL EACHYRVTLV ELASSAITML  60
LNGKVKFDLV MANINSPDLH GFKLLQQAVN MDIPVVLMSV DDNVFIAMRA IENGAFLFIK  120
KPTSMEVLSG LWQHVIREKT RAMRERERSC VAANYNVRGI EFREVVHEDP EENPNHMYGV  180
MMNDKGKGKK KINIRGNYDE YDLENHIMMN NKVKRKVCTE WTQELHEKFM EAVEQLGEGR  240
CFPKEILELM NVPGLTRMQV ASHLQKCRND NWRSPGERKT HNLAIQPLSS DTDGSQRPRR  300
FGSMPRLSRA SSYRVPGHEG SGVGESSKTN SPTEMPNSGG VVDQNMEISG PIMPNASYHQ  360
HYGTLIPHPS TLPGTIPSNP MHQSDDFFNF ADMDRLIQNF SGFPQGPLAG MNNPGSSSGG  420
YHFDATYHHG YDQNNVRPSA DTAGSGQWSS GTSNFGSDEY SETRGHN
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011072587.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011072587.10.0two-component response regulator ARR14-like
TrEMBLA0A2Z7CBP51e-127A0A2Z7CBP5_9LAMI; Uncharacterized protein
STRINGMigut.D00936.1.p1e-145(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA8132384
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G16110.12e-42response regulator 2