PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_011071299.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
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Family | ERF | ||||||||
Protein Properties | Length: 390aa MW: 42419.7 Da PI: 5.1116 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 54.8 | 2.4e-17 | 50 | 99 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +gr++AeIrdp + + r +lg+f+taeeAa a++ a+++++g XP_011071299.1 50 RYRGVRRRP-WGRYAAEIRDPQT---KERRWLGTFDTAEEAACAYDCAARAMRG 99 59*******.**********943...4999**********************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF00847 | 9.4E-11 | 50 | 99 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 3.5E-29 | 50 | 106 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 6.4E-34 | 50 | 113 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 22.049 | 50 | 107 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 5.04E-21 | 50 | 107 | IPR016177 | DNA-binding domain |
CDD | cd00018 | 3.45E-30 | 50 | 106 | No hit | No description |
PRINTS | PR00367 | 2.2E-9 | 51 | 62 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 2.2E-9 | 73 | 89 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0009733 | Biological Process | response to auxin | ||||
GO:0009880 | Biological Process | embryonic pattern specification | ||||
GO:0048825 | Biological Process | cotyledon development | ||||
GO:0051726 | Biological Process | regulation of cell cycle | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 390 aa Download sequence Send to blast |
MEEALRRLNG TLTTDSDPLL QPTTAVPKRC STNKRSLKDG SAPSGGGSMR YRGVRRRPWG 60 RYAAEIRDPQ TKERRWLGTF DTAEEAACAY DCAARAMRGV KARTNFVYPT SPTQPASENH 120 VPSFNHGKSS QPSSILGSRQ LVSSSPLSNP NLDFDGSSFN SPNNMLLLRD YSNWSALHEK 180 MPPYFLSNSC SSTQNAFMGS SSLVDLSCNA TCQPTCMNTA IDSEISFNSS SISSSEGLEN 240 NSSELVLTSA ASTDKADHCF DFFLTERSGS GLLQEVLNGF FPNCKAERKA EPPRSTVDSF 300 APPAPAAEQK QVKGDRGYGY EYQGFSTANY EAAQQFESLS TGGNLFGVEN EFQGSNIDQI 360 NSSNGILGDI SHYQEALSVF AAAECFNLTW |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5wx9_A | 9e-19 | 37 | 106 | 1 | 71 | Ethylene-responsive transcription factor ERF096 |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_011071299.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011071299.1 | 0.0 | ethylene-responsive transcription factor ESR2-like | ||||
TrEMBL | A0A2G9GV38 | 1e-137 | A0A2G9GV38_9LAMI; Uncharacterized protein | ||||
STRING | Migut.K00605.1.p | 8e-93 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA21 | 24 | 1165 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G24590.1 | 2e-16 | DORNROSCHEN-like |