PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011070809.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family ERF
Protein Properties Length: 354aa    MW: 39305 Da    PI: 4.3773
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011070809.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.32.2e-19111159254
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkle 54 
                     +y+GVr++k +g+W+AeIrdp     + kr++lg++ taeeA +a++  r+++e
  XP_011070809.1 111 KYRGVRQRK-WGKWAAEIRDPI----KhKRVWLGTYNTAEEASRAYELKRLEFE 159
                     8*******9.**********72....46**********************9987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541711.83E-17111158IPR016177DNA-binding domain
CDDcd000183.30E-24111151No hitNo description
PROSITE profilePS5103220.784111170IPR001471AP2/ERF domain
SMARTSM003809.6E-22111171IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.5E-22111157IPR001471AP2/ERF domain
PfamPF008471.3E-13111160IPR001471AP2/ERF domain
PRINTSPR003671.4E-10112123IPR001471AP2/ERF domain
PRINTSPR003671.4E-10134150IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 354 aa     Download sequence    Send to blast
MPEPRKPVPL SEETLSRKPR TRPEPARPMR KVRIICNDPD ATDSSDDEGV GEKKVKRIVR  60
EVCFPIGDSC REFKPVESES SIQDSNNGEK NPKKKRAFPL MESKPSPVTG KYRGVRQRKW  120
GKWAAEIRDP IKHKRVWLGT YNTAEEASRA YELKRLEFEA LANSVDSSYE KSSNDDTNRT  180
VCSVVVSEHV EILKQQKEAV VSASEDSSGS AASLTSHTSP SSVLELDSLT SALGVNEKRE  240
DEKANDVPLL EKKVVNSGLM DEELMALAQI GGEMDLDFEL ESLMVGDDFT ASLDDYVCDF  300
EDLPICGLED TDEPSALPDF DFDFNLEACN EALAWMDDTP PLMNGAPPLN IACP
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A5e-141101521356Ethylene-responsive transcription factor ERF096
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00217DAPTransfer from AT1G68550Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011070809.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011070810.10.0ethylene-responsive transcription factor ERF118-like
TrEMBLA0A2G9GJ620.0A0A2G9GJ62_9LAMI; Uncharacterized protein
STRINGMigut.E00335.1.p1e-116(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA29572351
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68550.28e-36ERF family protein