PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011070552.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family HSF
Protein Properties Length: 447aa    MW: 50783.2 Da    PI: 4.4593
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011070552.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind115.82.7e-36141052102
                     HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS
    HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 
                     Fl k ye+++de+++elisw+e+++sf+++de++f++++LpkyFkhsnf+SFvRQLn+YgF+k+++++         w+F+++ F kg+k+ll++
  XP_011070552.1  14 FLVKCYEMVNDESTNELISWTESNDSFIIWDESKFSSQLLPKYFKHSNFSSFVRQLNIYGFRKIDTDR---------WQFANEAFIKGQKHLLKN 99 
                     9****************************************************************999.........****************** PP

                     XXXXXX CS
    HSF_DNA-bind  97 ikrkks 102
                     i r+k+
  XP_011070552.1 100 ISRRKQ 105
                     ****97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF467851.54E-349103IPR011991Winged helix-turn-helix DNA-binding domain
SMARTSM004155.8E-5510103IPR000232Heat shock factor (HSF)-type, DNA-binding
Gene3DG3DSA:1.10.10.103.5E-3711103IPR011991Winged helix-turn-helix DNA-binding domain
PfamPF004471.1E-3014103IPR000232Heat shock factor (HSF)-type, DNA-binding
PRINTSPR000562.4E-181437IPR000232Heat shock factor (HSF)-type, DNA-binding
PRINTSPR000562.4E-185264IPR000232Heat shock factor (HSF)-type, DNA-binding
PROSITE patternPS0043405377IPR000232Heat shock factor (HSF)-type, DNA-binding
PRINTSPR000562.4E-186577IPR000232Heat shock factor (HSF)-type, DNA-binding
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 447 aa     Download sequence    Send to blast
MVKSVENGTS LPPFLVKCYE MVNDESTNEL ISWTESNDSF IIWDESKFSS QLLPKYFKHS  60
NFSSFVRQLN IYGFRKIDTD RWQFANEAFI KGQKHLLKNI SRRKQPHNLV QKKSPQLKET  120
ETPVSSEEDK RMALWKEVET LKSDKISLTQ ELKKLSQHQQ TSQSKLLLLR EQLKGMEKNQ  180
QQMLSFIVMA MQSPEFMVQF FQPKENSWRM TETGKNKLSE VTDDCEPSPS DGTIVRYELP  240
KGGHSVPPAC TTEASNSEAG KEKLSEVMED CQQTPSVGMI VRYQPPENGH SVPPACTTEA  300
YNTEDLMELD FTSDEMRDLL MDIDLLVGPM DEKLLSLENH GQFVLPDIPE DDTMLEQLLL  360
SDPPTGTQQL VEFEAGACTD HKMQIGLTLQ PEESEEPNGS DNDVNDHQNQ VAEAREAQIP  420
TDASDKMDVL TKQMGLLTSE ISCKQIS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5d5u_B8e-25910324129Heat shock factor protein 1
5d5v_B8e-25910324129Heat shock factor protein 1
5d5v_D8e-25910324129Heat shock factor protein 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011070552.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011070552.10.0heat stress transcription factor A-8
TrEMBLA0A4D8Z2U81e-177A0A4D8Z2U8_SALSN; Heat shock transcription factor, other eukaryote
TrEMBLA0A4D9A9C61e-177A0A4D9A9C6_SALSN; Heat shock transcription factor, other eukaryote
STRINGMigut.E00498.1.p1e-139(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA122352222
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G67970.12e-77heat shock transcription factor A8