PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_011069985.1

Organism

Sesamum indicum

Taxonomic ID

4182

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum

Family

bZIP

Protein Properties

Length: 335aa MW: 36690.3 Da PI: 9.7259

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_011069985.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	50	6.7e-16	265	313	5	54
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkk 54 +r++r++kNRe+A rsR+RK+a++ eLe+kv Le+eN++Lk + +el+k XP_011069985.1 265 RRQKRMIKNRESAARSRARKQAYTHELENKVSRLEEENERLK-RQKELEK 313 79***************************************9.6666665 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	5.5E-15	255	312	No hit	No description
SMART	SM00338	6.2E-13	261	329	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	11.634	263	308	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	1.25E-10	265	310	No hit	No description
CDD	cd14707	2.30E-25	265	313	No hit	No description
Pfam	PF00170	1.4E-12	265	308	IPR004827	Basic-leucine zipper domain
PROSITE pattern	PS00036	0	268	283	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0009737	Biological Process	response to abscisic acid
GO:0005634	Cellular Component	nucleus
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 335 aa Download sequence Send to blast
MVARMGTQGG GSNSIGGTQA QTQIQTQDPK SNPLARQGSL YSLTLDEVQN QLGDLGKPLS 60 SMNLDELLKT VWTVEANNQA TGSVDYGPAA QQPGQPVSGS SLNQQSNLML PTDLSKKTVD 120 EVWQDIQQGH KRGSLDRKAT LGEMTLEDFL VKAGVVAESS AGKRNSGLGG ADPMGLPQQA 180 QWMNFQIPSV HSQQQQKHSM LPVFMPGHSV QQPIPLGGNP IMDAAYSETQ ITMSSSPMMG 240 TLSDTQTPGR KRVAPDDIAE KSVERRQKRM IKNRESAARS RARKQAYTHE LENKVSRLEE 300 ENERLKRQKE LEKVLPSIPP PEPKYQLRRT SSAPI

Functional Description ? help Back to Top
Source	Description
UniProt	Binds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development.

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00409	DAP	Transfer from AT3G56850	Download

Cis-element ? help Back to Top
Source	Link
PlantRegMap	XP_011069985.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	Retrieve

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011069985.1	0.0	ABSCISIC ACID-INSENSITIVE 5-like protein 2
Swissprot	Q9LES3	1e-100	AI5L2_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 2
TrEMBL	A0A2G9GMH8	0.0	A0A2G9GMH8_9LAMI; Uncharacterized protein
STRING	PGSC0003DMT400072260	1e-154	(Solanum tuberosum)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA3334	24	48

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G56850.1	1e-103	ABA-responsive element binding protein 3

Publications ? help Back to Top
Kim H, et al. ABA-HYPERSENSITIVE BTB/POZ PROTEIN 1 functions as a negative regulator in ABA-mediated inhibition of germination in Arabidopsis. Plant Mol. Biol., 2016. 90(3): p. 303-15 [PMID:26667153] Song C,Kim T,Chung WS,Lim CO The Arabidopsis Phytocystatin AtCYS5 Enhances Seed Germination and Seedling Growth under Heat Stress Conditions. Mol. Cells, 2017. 40(8): p. 577-586 [PMID:28756655]