PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011069738.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family C2H2
Protein Properties Length: 440aa    MW: 51342.1 Da    PI: 7.8949
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011069738.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H217.89.2e-06164187123
                     EEETTTTEEESSHHHHHHHHHH.T CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirt.H 23 
                     y+C+ Cg+ ++++++Lk+H r  H
  XP_011069738.1 164 YVCSVCGRKCKTNMDLKKHFRQlH 187
                     9******************99877 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576678.86E-5159192No hitNo description
SMARTSM003550.0048164187IPR015880Zinc finger, C2H2-like
PROSITE profilePS5015711.489164192IPR007087Zinc finger, C2H2
PROSITE patternPS000280166187IPR007087Zinc finger, C2H2
Gene3DG3DSA:3.40.50.10102.1E-7174316IPR029060PIN domain-like
CDDcd061671.38E-13176318No hitNo description
PfamPF019362.8E-5237304IPR021139NYN domain, limkain-b1-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 440 aa     Download sequence    Send to blast
MAIISSSLFS SIERPPLKRQ FPFFPFPSHA HKLKPHCGVY FPFNLKKPVN LFNCRPHRWH  60
PIKSCVSNQE IDMVRTKEGV YAAKAKKVVV LWDLDNKPPR GPPYEAALAL KLMAQKFGDV  120
IDMSAYANRH AFIHVPQWVV EERRERRHLD FLERKGQSTA SEPYVCSVCG RKCKTNMDLK  180
KHFRQLHERE RQKKLNRMRS LKGKKRQRFK ERFIDGNEKY NEAARSLLTP KIGYGLAQEL  240
RRAGVYVKTV QDKPQAADWA LKRQMLHSMS RGVDWIVLVS DDSDFSEMLR KAREANLGTV  300
VVGDRDRALG RHADVWVPWI RVQNGEIKES DLELTSKEWR ELDERRSGRF SVSEFDGELA  360
YTEQSLDELV GNIEFNGLRI SSFSEGEEEY EKEADWIRAR LDQRNNDDVP LRGDSSEDEE  420
GDYFLDSEDE ELQEENDVYF
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011069738.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011069738.10.0uncharacterized protein LOC105155542
TrEMBLA0A2G9GXZ90.0A0A2G9GXZ9_9LAMI; Uncharacterized protein
STRINGMigut.C00545.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA122681518
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52010.11e-155C2H2-like zinc finger protein