PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_011069622.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
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Family | GeBP | ||||||||
Protein Properties | Length: 282aa MW: 32128.1 Da PI: 9.8734 | ||||||||
Description | GeBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF573 | 35 | 3.9e-11 | 70 | 98 | 2 | 30 |
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgksp 30 lfqrlwse+Deiv+L+G+id+ +k++++p XP_011069622.1 70 LFQRLWSEDDEIVILKGMIDYVTKKKSDP 98 69*******************99998754 PP | |||||||
2 | DUF573 | 96.4 | 2.8e-30 | 200 | 282 | 2 | 84 |
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskeh 84 lfqrlws++Deiv+L+G+id+ +k++++++ d++af++f+kk+++++v+++ql +KirrL+kK++++++k k+gk+ +fsk+h XP_011069622.1 200 LFQRLWSDDDEIVILKGMIDYVTKKKSDQVTDLNAFHDFIKKNLHVDVTRTQLQDKIRRLRKKYENNKSKEKEGKDRTFSKPH 282 69******************************************************************************998 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04504 | 2.4E-7 | 71 | 101 | IPR007592 | Protein of unknown function DUF573 |
Pfam | PF04504 | 4.1E-26 | 201 | 282 | IPR007592 | Protein of unknown function DUF573 |
Sequence ? help Back to Top |
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Protein Sequence Length: 282 aa Download sequence Send to blast |
MKNEQKSNYG ARKFRSKPIA SDLVTPAKST AAKRPAEEKE TETKDAKKSK KKAEPDTCEK 60 KSTDDSKKLL FQRLWSEDDE IVILKGMIDY VTKKKSDPPP SSSDEEESGS ESESDSDEPD 120 PNIKPVASKP MENEQKSNDG ARKFRSKPIA SDLVTPAKST AAKRPAEEKE TETKDAKKSK 180 KKAEPDTCEK KSTDDSKKLL FQRLWSDDDE IVILKGMIDY VTKKKSDQVT DLNAFHDFIK 240 KNLHVDVTRT QLQDKIRRLR KKYENNKSKE KEGKDRTFSK PH |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_011069622.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020547420.1 | 1e-104 | GLABROUS1 enhancer-binding protein-like | ||||
TrEMBL | A0A2Z7D2M7 | 1e-52 | A0A2Z7D2M7_9LAMI; Mediator-associated protein 1 | ||||
STRING | Migut.M01263.1.p | 1e-60 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA3042 | 19 | 47 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G00390.1 | 3e-17 | DNA-binding storekeeper protein-related transcriptional regulator |