PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_011069555.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
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Family | ERF | ||||||||
Protein Properties | Length: 242aa MW: 26264.9 Da PI: 6.3458 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 57.8 | 2.8e-18 | 34 | 83 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +ykGVr ++ +g+Wv+eIr p ++++r++lg++ t+e Aa+a++aa ++l+g XP_011069555.1 34 KYKGVRMRS-WGSWVSEIRAP---NQKTRIWLGSYSTPEAAARAYDAALLCLKG 83 8*****998.**********9...336************************998 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF00847 | 1.5E-11 | 34 | 83 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 9.0E-30 | 34 | 92 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 2.6E-35 | 34 | 97 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 21.694 | 34 | 91 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 4.11E-20 | 34 | 91 | No hit | No description |
SuperFamily | SSF54171 | 7.19E-20 | 34 | 92 | IPR016177 | DNA-binding domain |
PRINTS | PR00367 | 1.7E-8 | 35 | 46 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 1.7E-8 | 57 | 73 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0009751 | Biological Process | response to salicylic acid | ||||
GO:0009753 | Biological Process | response to jasmonic acid | ||||
GO:0034605 | Biological Process | cellular response to heat | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:0071497 | Biological Process | cellular response to freezing | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 242 aa Download sequence Send to blast |
MVKSGNKKIN IPCSSTTPAA AATANSSKSQ CKNKYKGVRM RSWGSWVSEI RAPNQKTRIW 60 LGSYSTPEAA ARAYDAALLC LKGSSANLNF PLNSTHNNPN PDNAIMSPKS IQRVAAAAAA 120 AANADQDSAH FINPHSPLLS ATSSSSNTWS STSSPSLSSS SPNSDSNIHN IDDDRISLAA 180 PAADDYKVHD NQLDEPSVFA MSSWYNFDSP KYTEMLNGVF FDPTMMEDYS YEDTDIRLWS 240 FC |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5wx9_A | 1e-13 | 33 | 91 | 13 | 72 | Ethylene-responsive transcription factor ERF096 |
Search in ModeBase |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00156 | DAP | Transfer from AT1G21910 | Download |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_011069555.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | KJ043214 | 1e-51 | KJ043214.1 Sesamum indicum clone TilSSR_14415 microsatellite Sesame_14415 sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011069555.1 | 1e-177 | ethylene-responsive transcription factor ERF014 | ||||
TrEMBL | A0A2G9GNX2 | 2e-62 | A0A2G9GNX2_9LAMI; Uncharacterized protein | ||||
STRING | Migut.N03295.1.p | 5e-53 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA6177 | 24 | 35 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G21910.1 | 1e-32 | ERF family protein |