PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_011069419.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
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Family | NAC | ||||||||
Protein Properties | Length: 286aa MW: 32367.6 Da PI: 5.983 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 169.4 | 1.1e-52 | 8 | 132 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdeelv++yL++k++++++ + +i+evd+yk++PwdLp + +ekewyfFs+rd+ky++g+r+nra+ sgyWkatg dk++ + XP_011069419.1 8 LPPGFRFHPTDEELVMHYLCRKCASQSIGV-PIIAEVDLYKYDPWDLPGLALYGEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPIGH- 100 79*************************999.88***************6555679*************************************99. PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrl 128 + vg+kk Lvfy+g+ap+gekt+W+mheyrl XP_011069419.1 101 -PKPVGIKKALVFYSGKAPRGEKTNWIMHEYRL 132 .789***************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 1.02E-62 | 4 | 159 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 60.503 | 8 | 159 | IPR003441 | NAC domain |
Pfam | PF02365 | 7.5E-28 | 9 | 132 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0009611 | Biological Process | response to wounding | ||||
GO:0009788 | Biological Process | negative regulation of abscisic acid-activated signaling pathway | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 286 aa Download sequence Send to blast |
MAAVDLQLPP GFRFHPTDEE LVMHYLCRKC ASQSIGVPII AEVDLYKYDP WDLPGLALYG 60 EKEWYFFSPR DRKYPNGSRP NRAAGSGYWK ATGADKPIGH PKPVGIKKAL VFYSGKAPRG 120 EKTNWIMHEY RLADVDRSAR KKNNSLRLDD WVLCRIYNKK GTIERQQENV SSRNMASAVT 180 SEEDIKPVGL TSVPEAPPLA YEDFVYFDPS DSIPRLHTDS SCSEHVLSPE VESAPKLAEW 240 EKSAIEFPFS YMDAGNGACT LMSSQFEGNY QMDPMNDVFT YITKPF |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 3e-81 | 2 | 165 | 9 | 174 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00121 | DAP | Transfer from AT1G01720 | Download |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_011069419.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011069419.1 | 0.0 | NAC domain-containing protein 2 | ||||
Swissprot | Q39013 | 1e-133 | NAC2_ARATH; NAC domain-containing protein 2 | ||||
TrEMBL | A0A2G9HHN7 | 0.0 | A0A2G9HHN7_9LAMI; Uncharacterized protein | ||||
STRING | Migut.C01110.1.p | 1e-175 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA1239 | 24 | 81 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G01720.1 | 1e-135 | NAC family protein |