PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Sphfalx0784s0002.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
|
||||||||
Family | C2H2 | ||||||||
Protein Properties | Length: 217aa MW: 24962.2 Da PI: 6.3055 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 13.5 | 0.00021 | 23 | 43 | 2 | 22 |
EETTTTEEESSHHHHHHHHHH CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt 22 +C+ Cg sF + + +H+r+ Sphfalx0784s0002.1.p 23 VCSTCGPSFEDMAKYSSHLRK 43 6******************96 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF02992 | 3.8E-11 | 1 | 66 | IPR004242 | Transposon, En/Spm-like |
PROSITE profile | PS50157 | 8.559 | 22 | 54 | IPR007087 | Zinc finger, C2H2 |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0046872 | Molecular Function | metal ion binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 217 aa Download sequence Send to blast |
MWTTHDYPGF GFVSGLQTQG YKVCSTCGPS FEDMAKYSSH LRKFFYLGHT KFLPLGHDMR 60 SDPLLFSSFD MPYGDERDIP EATTFAYWRD VANRVIDPND SMVFEGSGLT RWGILNSLPY 120 WGELKIRHLL DPMHIEGNVG KAIIKQLYGE KDSNFNREAC EDFERHPDVW ITVDPNTGIE 180 QRPLAPWTLT THERRNFRNR IGEMRFPIGL NFDGKG* |
Link Out ? help Back to Top | |
---|---|
Phytozome | Sphfalx0784s0002.1.p |