PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Sphfalx0331s0001.1.p

Organism

Sphagnum fallax

Taxonomic ID

53036

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum

Family

G2-like

Protein Properties

Length: 652aa MW: 70608.8 Da PI: 6.9097

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Sphfalx0331s0001.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	102.7	2.2e-32	101	154	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWt +LH++Fv+ave+LGG+e+AtPk +l+lm+vkgLt++hvkSHLQ+YR+ Sphfalx0331s0001.1.p 101 PRLRWTADLHHCFVHAVERLGGQERATPKLVLQLMEVKGLTIAHVKSHLQMYRS 154 8****************************************************7 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	3.1E-31	97	156	IPR009057	Homeodomain-like
PROSITE profile	PS51294	10.341	97	157	IPR017930	Myb domain
SuperFamily	SSF46689	8.42E-15	99	156	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	5.2E-23	101	155	IPR006447	Myb domain, plants
Pfam	PF00249	4.3E-8	102	153	IPR001005	SANT/Myb domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 652 aa Download sequence Send to blast
MQPKEEHSNS SEQQEKWGHG SNHLLNKRPH TSVSCGDHDD QYVVEQSSES HNTATGGGSS 60 SSPASGNRGG FLQGGSYTSS AGGGSTRPGG TVRQYLRSKM PRLRWTADLH HCFVHAVERL 120 GGQERATPKL VLQLMEVKGL TIAHVKSHLQ MYRSMKNDEN GHSGRGTLAG HEEDDDDQGL 180 EFQDTSDATH ELQLMNAARR FPHHGIIHAA AAAEYGAGST NSLAAFSLQP DTDFSGGQHQ 240 HIIHNFLRRP PAGVMQQQSD LELDHHLTMS LRQNVHEEWV PRPAAAALGS TGVQKTATGL 300 LGWPALHGEG GRNATPVAVD WSRGDLKSLT GITLPGHSMD LRTELDEWSR RPSPALLAEP 360 WNQRQQRHQA KDAGIERLYS VAHQDGIQQQ HRALDYPSLE GGDSLKKQRM MMHTDCERWG 420 SQDELPRMDQ VGLKIAHLGQ SVGAHATAST ASSLASPLHF RQLLDSSCGS SNMQGEQARG 480 GAHGEVAGGG RGLVIGADWG MSDVQRKRAF AQSQRGMEHE AEPGAEKKSR FSSGPELPQP 540 IRPSAFQPPA GSWFSSSRKQ AGGVQSTDER DCSNHDQQQL DSTTSLSLSP YSSRTKSYSP 600 PSWITRSFSL PPGTNEEISD CLSLQHRESA AAVQVPPKGI TLDLTMSIGG Q*

Sequence ? help Back to Top

Protein Sequence Length: 652 aa Download sequence Send to blast

MQPKEEHSNS SEQQEKWGHG SNHLLNKRPH TSVSCGDHDD QYVVEQSSES HNTATGGGSS  60
SSPASGNRGG FLQGGSYTSS AGGGSTRPGG TVRQYLRSKM PRLRWTADLH HCFVHAVERL  120
GGQERATPKL VLQLMEVKGL TIAHVKSHLQ MYRSMKNDEN GHSGRGTLAG HEEDDDDQGL  180
EFQDTSDATH ELQLMNAARR FPHHGIIHAA AAAEYGAGST NSLAAFSLQP DTDFSGGQHQ  240
HIIHNFLRRP PAGVMQQQSD LELDHHLTMS LRQNVHEEWV PRPAAAALGS TGVQKTATGL  300
LGWPALHGEG GRNATPVAVD WSRGDLKSLT GITLPGHSMD LRTELDEWSR RPSPALLAEP  360
WNQRQQRHQA KDAGIERLYS VAHQDGIQQQ HRALDYPSLE GGDSLKKQRM MMHTDCERWG  420
SQDELPRMDQ VGLKIAHLGQ SVGAHATAST ASSLASPLHF RQLLDSSCGS SNMQGEQARG  480
GAHGEVAGGG RGLVIGADWG MSDVQRKRAF AQSQRGMEHE AEPGAEKKSR FSSGPELPQP  540
IRPSAFQPPA GSWFSSSRKQ AGGVQSTDER DCSNHDQQQL DSTTSLSLSP YSSRTKSYSP  600
PSWITRSFSL PPGTNEEISD CLSLQHRESA AAVQVPPKGI TLDLTMSIGG Q*

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
6j4r_A	8e-17	102	156	3	57	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B	8e-17	102	156	3	57	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C	8e-17	102	156	3	57	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D	8e-17	102	156	3	57	Protein PHOSPHATE STARVATION RESPONSE 1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G40260.1	4e-31	G2-like family protein

Link Out ? help Back to Top
Phytozome	Sphfalx0331s0001.1.p