PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sphfalx0326s0015.9.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
Family G2-like
Protein Properties Length: 478aa    MW: 50998.5 Da    PI: 4.6401
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sphfalx0326s0015.9.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like322.7e-101203655
               G2-like 36 mkvkgLtlehvkSHLQkYRl 55
                          m+v+gLt++hvkSHLQkYRl
  Sphfalx0326s0015.9.p  1 MGVQGLTIYHVKSHLQKYRL 20
                          99*****************8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.601.8E-9121IPR009057Homeodomain-like
PfamPF143797.8E-16104142IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 478 aa     Download sequence    Send to blast
MGVQGLTIYH VKSHLQKYRL AKYDPAAVAA AAAVDSASAD DDAAAAAARK NLKNHLLLQP  60
AAYSDHVVPA AARPAASDTT SSDGTAATAA RGVTVDDASL VRNMQLEVQK RLHEQLEVQR  120
HLQLRIAAQA KYLRKIVEEQ QQQGSSTRPA LRLAVAQGEE PSTEANTRDD VAANVVEEEE  180
EEEEAEAEVE EQQLPDLRLS LAAEEVQEEL EEQEQGSAAV VPGASCSRDA SSIVEQAVAA  240
GDAASSRSPP SIKELHFEIT RSAALAGFPN DQASSAATPP PPPPLQTHDD DQQWRPRQSA  300
QGTGASASST VFTSCSSSWT YSEPASSTHD ESTDHAAPSL KRMRRFEDLY LQPPNMQQIS  360
FQGQTVKKEP STQQQQQQQQ QQQEGSSTLV WPAAGLDQQG DAAVRISLNS LQSAAAGTDD  420
HQAKTSHDLQ ADSEADHAVR QMFSRWEENS AAAAHKSSTS VTAAAIGNAR RDSAGAH*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G79430.15e-18G2-like family protein