PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Sphfalx0326s0015.7.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
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Family | G2-like | ||||||||
Protein Properties | Length: 552aa MW: 58767.3 Da PI: 5.0298 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 106.6 | 1.4e-33 | 41 | 95 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+rlrW+peLHerFveav+qLGG+e+AtPk +l+lm+v+gLt++hvkSHLQkYRl Sphfalx0326s0015.7.p 41 KQRLRWSPELHERFVEAVAQLGGPERATPKGVLRLMGVQGLTIYHVKSHLQKYRL 95 79****************************************************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51294 | 14.723 | 38 | 98 | IPR017930 | Myb domain |
Gene3D | G3DSA:1.10.10.60 | 5.3E-32 | 39 | 96 | IPR009057 | Homeodomain-like |
SuperFamily | SSF46689 | 3.4E-17 | 40 | 96 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 8.6E-25 | 41 | 96 | IPR006447 | Myb domain, plants |
Pfam | PF00249 | 3.6E-10 | 43 | 94 | IPR001005 | SANT/Myb domain |
Pfam | PF14379 | 9.4E-16 | 178 | 216 | IPR025756 | MYB-CC type transcription factor, LHEQLE-containing domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 552 aa Download sequence Send to blast |
MYQTKKFAPI SSSFRTATNS AQISPAGAAA AGSSSAGSAA KQRLRWSPEL HERFVEAVAQ 60 LGGPERATPK GVLRLMGVQG LTIYHVKSHL QKYRLAKYDP AAVAAAAAVD SASADDDAAA 120 AARKNLKNHL LLQPAAYSDH VVPAAARPAA SDTTSSDGTA ATAARGVTVD DASLVRNMQL 180 EVQKRLHEQL EVQRHLQLRI AAQAKYLRKI VEEQQQQGSS TRPALRLAVA QGEEPSTEAN 240 TRDDVAANVV EEEEEEEEAE AEVEEQQLPD LRLSLAAEEV QEELEEQEQG SAAVVPGASC 300 SRDASSIVEQ AVAAGDAASS RSPPSIKELH FEITRSAALA GFPNDQASSA ATPPPPPPLQ 360 THDDDQQWRP RQSAQGTGAS ASSTVFTSCS SSWTYSEPAS STHDESTDHA APSLKRMRRF 420 EDLYLQPPNM QQISFQGQTV KKEPSTQQQQ QQQQQQQEGS STLVWPAAGL DQQGDAAVRI 480 SLNSLQSAAA GTDDHQAKTS HDLQADSEAD HAVRQMFSRW EENSAAAAHK SSTSVTAAAI 540 GNARRDSAGA H* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
6j4k_A | 1e-23 | 40 | 98 | 1 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4k_B | 1e-23 | 40 | 98 | 1 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_A | 1e-23 | 40 | 98 | 1 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_C | 1e-23 | 40 | 98 | 1 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_D | 1e-23 | 40 | 98 | 1 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_F | 1e-23 | 40 | 98 | 1 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_H | 1e-23 | 40 | 98 | 1 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_J | 1e-23 | 40 | 98 | 1 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G79430.2 | 3e-37 | G2-like family protein |
Link Out ? help Back to Top | |
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Phytozome | Sphfalx0326s0015.7.p |