PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Sphfalx0326s0015.6.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
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Family | G2-like | ||||||||
Protein Properties | Length: 553aa MW: 58838.3 Da PI: 5.0298 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 106.6 | 1.4e-33 | 41 | 95 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+rlrW+peLHerFveav+qLGG+e+AtPk +l+lm+v+gLt++hvkSHLQkYRl Sphfalx0326s0015.6.p 41 KQRLRWSPELHERFVEAVAQLGGPERATPKGVLRLMGVQGLTIYHVKSHLQKYRL 95 79****************************************************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51294 | 14.723 | 38 | 98 | IPR017930 | Myb domain |
Gene3D | G3DSA:1.10.10.60 | 5.3E-32 | 39 | 96 | IPR009057 | Homeodomain-like |
SuperFamily | SSF46689 | 3.4E-17 | 40 | 96 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 8.6E-25 | 41 | 96 | IPR006447 | Myb domain, plants |
Pfam | PF00249 | 3.6E-10 | 43 | 94 | IPR001005 | SANT/Myb domain |
Pfam | PF14379 | 9.4E-16 | 179 | 217 | IPR025756 | MYB-CC type transcription factor, LHEQLE-containing domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 553 aa Download sequence Send to blast |
MYQTKKFAPI SSSFRTATNS AQISPAGAAA AGSSSAGSAA KQRLRWSPEL HERFVEAVAQ 60 LGGPERATPK GVLRLMGVQG LTIYHVKSHL QKYRLAKYDP AAVAAAAAVD SASADDDAAA 120 AAARKNLKNH LLLQPAAYSD HVVPAAARPA ASDTTSSDGT AATAARGVTV DDASLVRNMQ 180 LEVQKRLHEQ LEVQRHLQLR IAAQAKYLRK IVEEQQQQGS STRPALRLAV AQGEEPSTEA 240 NTRDDVAANV VEEEEEEEEA EAEVEEQQLP DLRLSLAAEE VQEELEEQEQ GSAAVVPGAS 300 CSRDASSIVE QAVAAGDAAS SRSPPSIKEL HFEITRSAAL AGFPNDQASS AATPPPPPPL 360 QTHDDDQQWR PRQSAQGTGA SASSTVFTSC SSSWTYSEPA SSTHDESTDH AAPSLKRMRR 420 FEDLYLQPPN MQQISFQGQT VKKEPSTQQQ QQQQQQQQEG SSTLVWPAAG LDQQGDAAVR 480 ISLNSLQSAA AGTDDHQAKT SHDLQADSEA DHAVRQMFSR WEENSAAAAH KSSTSVTAAA 540 IGNARRDSAG AH* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
6j4k_A | 1e-23 | 40 | 98 | 1 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4k_B | 1e-23 | 40 | 98 | 1 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_A | 1e-23 | 40 | 98 | 1 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_C | 1e-23 | 40 | 98 | 1 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_D | 1e-23 | 40 | 98 | 1 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_F | 1e-23 | 40 | 98 | 1 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_H | 1e-23 | 40 | 98 | 1 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_J | 1e-23 | 40 | 98 | 1 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G79430.2 | 4e-37 | G2-like family protein |
Link Out ? help Back to Top | |
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Phytozome | Sphfalx0326s0015.6.p |