PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Sphfalx0326s0015.3.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
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Family | G2-like | ||||||||
Protein Properties | Length: 596aa MW: 63250.4 Da PI: 5.1939 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 106.5 | 1.5e-33 | 85 | 139 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+rlrW+peLHerFveav+qLGG+e+AtPk +l+lm+v+gLt++hvkSHLQkYRl Sphfalx0326s0015.3.p 85 KQRLRWSPELHERFVEAVAQLGGPERATPKGVLRLMGVQGLTIYHVKSHLQKYRL 139 79****************************************************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51294 | 14.723 | 82 | 142 | IPR017930 | Myb domain |
Gene3D | G3DSA:1.10.10.60 | 5.9E-32 | 83 | 140 | IPR009057 | Homeodomain-like |
SuperFamily | SSF46689 | 3.94E-17 | 84 | 140 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 9.6E-25 | 85 | 140 | IPR006447 | Myb domain, plants |
Pfam | PF00249 | 4.0E-10 | 87 | 138 | IPR001005 | SANT/Myb domain |
Pfam | PF14379 | 1.0E-15 | 222 | 260 | IPR025756 | MYB-CC type transcription factor, LHEQLE-containing domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 596 aa Download sequence Send to blast |
MCRLLPSTES LAGTYTSLIR LIIFRRAATT TTAAAAAAGS AEATMYQTKK FAPISSSFRT 60 ATNSAQISPA GAAAAGSSSA GSAAKQRLRW SPELHERFVE AVAQLGGPER ATPKGVLRLM 120 GVQGLTIYHV KSHLQKYRLA KYDPAAVAAA AAVDSASADD DAAAAARKNL KNHLLLQPAA 180 YSDHVVPAAA RPAASDTTSS DGTAATAARG VTVDDASLVR NMQLEVQKRL HEQLEVQRHL 240 QLRIAAQAKY LRKIVEEQQQ QGSSTRPALR LAVAQGEEPS TEANTRDDVA ANVVEEEEEE 300 EEAEAEVEEQ QLPDLRLSLA AEEVQEELEE QEQGSAAVVP GASCSRDASS IVEQAVAAGD 360 AASSRSPPSI KELHFEITRS AALAGFPNDQ ASSAATPPPP PPLQTHDDDQ QWRPRQSAQG 420 TGASASSTVF TSCSSSWTYS EPASSTHDES TDHAAPSLKR MRRFEDLYLQ PPNMQQISFQ 480 GQTVKKEPST QQQQQQQQQQ QEGSSTLVWP AAGLDQQGDA AVRISLNSLQ SAAAGTDDHQ 540 AKTSHDLQAD SEADHAVRQM FSRWEENSAA AAHKSSTSVT AAAIGNARRD SAGAH* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
6j4k_A | 1e-23 | 84 | 142 | 1 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4k_B | 1e-23 | 84 | 142 | 1 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_A | 1e-23 | 84 | 142 | 1 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_C | 1e-23 | 84 | 142 | 1 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_D | 1e-23 | 84 | 142 | 1 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_F | 1e-23 | 84 | 142 | 1 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_H | 1e-23 | 84 | 142 | 1 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_J | 1e-23 | 84 | 142 | 1 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G79430.2 | 4e-37 | G2-like family protein |
Link Out ? help Back to Top | |
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Phytozome | Sphfalx0326s0015.3.p |