PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Sphfalx0326s0015.2.p

Organism

Sphagnum fallax

Taxonomic ID

53036

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum

Family

G2-like

Protein Properties

Length: 597aa MW: 63321.5 Da PI: 5.1939

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Sphfalx0326s0015.2.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	106.5	1.5e-33	85	139	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+rlrW+peLHerFveav+qLGG+e+AtPk +l+lm+v+gLt++hvkSHLQkYRl Sphfalx0326s0015.2.p 85 KQRLRWSPELHERFVEAVAQLGGPERATPKGVLRLMGVQGLTIYHVKSHLQKYRL 139 79****************************************************8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51294	14.723	82	142	IPR017930	Myb domain
Gene3D	G3DSA:1.10.10.60	5.9E-32	83	140	IPR009057	Homeodomain-like
SuperFamily	SSF46689	3.94E-17	84	140	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	9.6E-25	85	140	IPR006447	Myb domain, plants
Pfam	PF00249	4.0E-10	87	138	IPR001005	SANT/Myb domain
Pfam	PF14379	1.0E-15	223	261	IPR025756	MYB-CC type transcription factor, LHEQLE-containing domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 597 aa Download sequence Send to blast
MCRLLPSTES LAGTYTSLIR LIIFRRAATT TTAAAAAAGS AEATMYQTKK FAPISSSFRT 60 ATNSAQISPA GAAAAGSSSA GSAAKQRLRW SPELHERFVE AVAQLGGPER ATPKGVLRLM 120 GVQGLTIYHV KSHLQKYRLA KYDPAAVAAA AAVDSASADD DAAAAAARKN LKNHLLLQPA 180 AYSDHVVPAA ARPAASDTTS SDGTAATAAR GVTVDDASLV RNMQLEVQKR LHEQLEVQRH 240 LQLRIAAQAK YLRKIVEEQQ QQGSSTRPAL RLAVAQGEEP STEANTRDDV AANVVEEEEE 300 EEEAEAEVEE QQLPDLRLSL AAEEVQEELE EQEQGSAAVV PGASCSRDAS SIVEQAVAAG 360 DAASSRSPPS IKELHFEITR SAALAGFPND QASSAATPPP PPPLQTHDDD QQWRPRQSAQ 420 GTGASASSTV FTSCSSSWTY SEPASSTHDE STDHAAPSLK RMRRFEDLYL QPPNMQQISF 480 QGQTVKKEPS TQQQQQQQQQ QQEGSSTLVW PAAGLDQQGD AAVRISLNSL QSAAAGTDDH 540 QAKTSHDLQA DSEADHAVRQ MFSRWEENSA AAAHKSSTSV TAAAIGNARR DSAGAH*

Sequence ? help Back to Top

Protein Sequence Length: 597 aa Download sequence Send to blast

MCRLLPSTES LAGTYTSLIR LIIFRRAATT TTAAAAAAGS AEATMYQTKK FAPISSSFRT  60
ATNSAQISPA GAAAAGSSSA GSAAKQRLRW SPELHERFVE AVAQLGGPER ATPKGVLRLM  120
GVQGLTIYHV KSHLQKYRLA KYDPAAVAAA AAVDSASADD DAAAAAARKN LKNHLLLQPA  180
AYSDHVVPAA ARPAASDTTS SDGTAATAAR GVTVDDASLV RNMQLEVQKR LHEQLEVQRH  240
LQLRIAAQAK YLRKIVEEQQ QQGSSTRPAL RLAVAQGEEP STEANTRDDV AANVVEEEEE  300
EEEAEAEVEE QQLPDLRLSL AAEEVQEELE EQEQGSAAVV PGASCSRDAS SIVEQAVAAG  360
DAASSRSPPS IKELHFEITR SAALAGFPND QASSAATPPP PPPLQTHDDD QQWRPRQSAQ  420
GTGASASSTV FTSCSSSWTY SEPASSTHDE STDHAAPSLK RMRRFEDLYL QPPNMQQISF  480
QGQTVKKEPS TQQQQQQQQQ QQEGSSTLVW PAAGLDQQGD AAVRISLNSL QSAAAGTDDH  540
QAKTSHDLQA DSEADHAVRQ MFSRWEENSA AAAHKSSTSV TAAAIGNARR DSAGAH*

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
6j4k_A	2e-23	84	142	1	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B	2e-23	84	142	1	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A	2e-23	84	142	1	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C	2e-23	84	142	1	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D	2e-23	84	142	1	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F	2e-23	84	142	1	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H	2e-23	84	142	1	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J	2e-23	84	142	1	59	Protein PHOSPHATE STARVATION RESPONSE 1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G79430.2	6e-37	G2-like family protein

Link Out ? help Back to Top
Phytozome	Sphfalx0326s0015.2.p