PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Sphfalx0326s0015.12.p

Organism

Sphagnum fallax

Taxonomic ID

53036

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum

Family

G2-like

Protein Properties

Length: 477aa MW: 50927.4 Da PI: 4.6401

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Sphfalx0326s0015.12.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	32	2.7e-10	1	20	36	55
G2-like 36 mkvkgLtlehvkSHLQkYRl 55 m+v+gLt++hvkSHLQkYRl Sphfalx0326s0015.12.p 1 MGVQGLTIYHVKSHLQKYRL 20 99*****************8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	1.8E-9	1	21	IPR009057	Homeodomain-like
Pfam	PF14379	7.8E-16	103	141	IPR025756	MYB-CC type transcription factor, LHEQLE-containing domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 477 aa Download sequence Send to blast
MGVQGLTIYH VKSHLQKYRL AKYDPAAVAA AAAVDSASAD DDAAAAARKN LKNHLLLQPA 60 AYSDHVVPAA ARPAASDTTS SDGTAATAAR GVTVDDASLV RNMQLEVQKR LHEQLEVQRH 120 LQLRIAAQAK YLRKIVEEQQ QQGSSTRPAL RLAVAQGEEP STEANTRDDV AANVVEEEEE 180 EEEAEAEVEE QQLPDLRLSL AAEEVQEELE EQEQGSAAVV PGASCSRDAS SIVEQAVAAG 240 DAASSRSPPS IKELHFEITR SAALAGFPND QASSAATPPP PPPLQTHDDD QQWRPRQSAQ 300 GTGASASSTV FTSCSSSWTY SEPASSTHDE STDHAAPSLK RMRRFEDLYL QPPNMQQISF 360 QGQTVKKEPS TQQQQQQQQQ QQEGSSTLVW PAAGLDQQGD AAVRISLNSL QSAAAGTDDH 420 QAKTSHDLQA DSEADHAVRQ MFSRWEENSA AAAHKSSTSV TAAAIGNARR DSAGAH*

Sequence ? help Back to Top

Protein Sequence Length: 477 aa Download sequence Send to blast

MGVQGLTIYH VKSHLQKYRL AKYDPAAVAA AAAVDSASAD DDAAAAARKN LKNHLLLQPA  60
AYSDHVVPAA ARPAASDTTS SDGTAATAAR GVTVDDASLV RNMQLEVQKR LHEQLEVQRH  120
LQLRIAAQAK YLRKIVEEQQ QQGSSTRPAL RLAVAQGEEP STEANTRDDV AANVVEEEEE  180
EEEAEAEVEE QQLPDLRLSL AAEEVQEELE EQEQGSAAVV PGASCSRDAS SIVEQAVAAG  240
DAASSRSPPS IKELHFEITR SAALAGFPND QASSAATPPP PPPLQTHDDD QQWRPRQSAQ  300
GTGASASSTV FTSCSSSWTY SEPASSTHDE STDHAAPSLK RMRRFEDLYL QPPNMQQISF  360
QGQTVKKEPS TQQQQQQQQQ QQEGSSTLVW PAAGLDQQGD AAVRISLNSL QSAAAGTDDH  420
QAKTSHDLQA DSEADHAVRQ MFSRWEENSA AAAHKSSTSV TAAAIGNARR DSAGAH*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G79430.1	4e-18	G2-like family protein

Link Out ? help Back to Top
Phytozome	Sphfalx0326s0015.12.p