PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Sphfalx0326s0015.11.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
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Family | G2-like | ||||||||
Protein Properties | Length: 477aa MW: 50927.4 Da PI: 4.6401 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 32 | 2.7e-10 | 1 | 20 | 36 | 55 |
G2-like 36 mkvkgLtlehvkSHLQkYRl 55 m+v+gLt++hvkSHLQkYRl Sphfalx0326s0015.11.p 1 MGVQGLTIYHVKSHLQKYRL 20 99*****************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.60 | 1.8E-9 | 1 | 21 | IPR009057 | Homeodomain-like |
Pfam | PF14379 | 7.8E-16 | 103 | 141 | IPR025756 | MYB-CC type transcription factor, LHEQLE-containing domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 477 aa Download sequence Send to blast |
MGVQGLTIYH VKSHLQKYRL AKYDPAAVAA AAAVDSASAD DDAAAAARKN LKNHLLLQPA 60 AYSDHVVPAA ARPAASDTTS SDGTAATAAR GVTVDDASLV RNMQLEVQKR LHEQLEVQRH 120 LQLRIAAQAK YLRKIVEEQQ QQGSSTRPAL RLAVAQGEEP STEANTRDDV AANVVEEEEE 180 EEEAEAEVEE QQLPDLRLSL AAEEVQEELE EQEQGSAAVV PGASCSRDAS SIVEQAVAAG 240 DAASSRSPPS IKELHFEITR SAALAGFPND QASSAATPPP PPPLQTHDDD QQWRPRQSAQ 300 GTGASASSTV FTSCSSSWTY SEPASSTHDE STDHAAPSLK RMRRFEDLYL QPPNMQQISF 360 QGQTVKKEPS TQQQQQQQQQ QQEGSSTLVW PAAGLDQQGD AAVRISLNSL QSAAAGTDDH 420 QAKTSHDLQA DSEADHAVRQ MFSRWEENSA AAAHKSSTSV TAAAIGNARR DSAGAH* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G79430.1 | 4e-18 | G2-like family protein |
Link Out ? help Back to Top | |
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Phytozome | Sphfalx0326s0015.11.p |