PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sphfalx0326s0015.11.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
Family G2-like
Protein Properties Length: 477aa    MW: 50927.4 Da    PI: 4.6401
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sphfalx0326s0015.11.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like322.7e-101203655
                G2-like 36 mkvkgLtlehvkSHLQkYRl 55
                           m+v+gLt++hvkSHLQkYRl
  Sphfalx0326s0015.11.p  1 MGVQGLTIYHVKSHLQKYRL 20
                           99*****************8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.601.8E-9121IPR009057Homeodomain-like
PfamPF143797.8E-16103141IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 477 aa     Download sequence    Send to blast
MGVQGLTIYH VKSHLQKYRL AKYDPAAVAA AAAVDSASAD DDAAAAARKN LKNHLLLQPA  60
AYSDHVVPAA ARPAASDTTS SDGTAATAAR GVTVDDASLV RNMQLEVQKR LHEQLEVQRH  120
LQLRIAAQAK YLRKIVEEQQ QQGSSTRPAL RLAVAQGEEP STEANTRDDV AANVVEEEEE  180
EEEAEAEVEE QQLPDLRLSL AAEEVQEELE EQEQGSAAVV PGASCSRDAS SIVEQAVAAG  240
DAASSRSPPS IKELHFEITR SAALAGFPND QASSAATPPP PPPLQTHDDD QQWRPRQSAQ  300
GTGASASSTV FTSCSSSWTY SEPASSTHDE STDHAAPSLK RMRRFEDLYL QPPNMQQISF  360
QGQTVKKEPS TQQQQQQQQQ QQEGSSTLVW PAAGLDQQGD AAVRISLNSL QSAAAGTDDH  420
QAKTSHDLQA DSEADHAVRQ MFSRWEENSA AAAHKSSTSV TAAAIGNARR DSAGAH*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G79430.14e-18G2-like family protein