PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Sphfalx0326s0015.10.p

Organism

Sphagnum fallax

Taxonomic ID

53036

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum

Family

G2-like

Protein Properties

Length: 478aa MW: 50998.5 Da PI: 4.6401

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Sphfalx0326s0015.10.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	32	2.7e-10	1	20	36	55
G2-like 36 mkvkgLtlehvkSHLQkYRl 55 m+v+gLt++hvkSHLQkYRl Sphfalx0326s0015.10.p 1 MGVQGLTIYHVKSHLQKYRL 20 99*****************8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	1.8E-9	1	21	IPR009057	Homeodomain-like
Pfam	PF14379	7.8E-16	104	142	IPR025756	MYB-CC type transcription factor, LHEQLE-containing domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 478 aa Download sequence Send to blast
MGVQGLTIYH VKSHLQKYRL AKYDPAAVAA AAAVDSASAD DDAAAAAARK NLKNHLLLQP 60 AAYSDHVVPA AARPAASDTT SSDGTAATAA RGVTVDDASL VRNMQLEVQK RLHEQLEVQR 120 HLQLRIAAQA KYLRKIVEEQ QQQGSSTRPA LRLAVAQGEE PSTEANTRDD VAANVVEEEE 180 EEEEAEAEVE EQQLPDLRLS LAAEEVQEEL EEQEQGSAAV VPGASCSRDA SSIVEQAVAA 240 GDAASSRSPP SIKELHFEIT RSAALAGFPN DQASSAATPP PPPPLQTHDD DQQWRPRQSA 300 QGTGASASST VFTSCSSSWT YSEPASSTHD ESTDHAAPSL KRMRRFEDLY LQPPNMQQIS 360 FQGQTVKKEP STQQQQQQQQ QQQEGSSTLV WPAAGLDQQG DAAVRISLNS LQSAAAGTDD 420 HQAKTSHDLQ ADSEADHAVR QMFSRWEENS AAAAHKSSTS VTAAAIGNAR RDSAGAH*

Sequence ? help Back to Top

Protein Sequence Length: 478 aa Download sequence Send to blast

MGVQGLTIYH VKSHLQKYRL AKYDPAAVAA AAAVDSASAD DDAAAAAARK NLKNHLLLQP  60
AAYSDHVVPA AARPAASDTT SSDGTAATAA RGVTVDDASL VRNMQLEVQK RLHEQLEVQR  120
HLQLRIAAQA KYLRKIVEEQ QQQGSSTRPA LRLAVAQGEE PSTEANTRDD VAANVVEEEE  180
EEEEAEAEVE EQQLPDLRLS LAAEEVQEEL EEQEQGSAAV VPGASCSRDA SSIVEQAVAA  240
GDAASSRSPP SIKELHFEIT RSAALAGFPN DQASSAATPP PPPPLQTHDD DQQWRPRQSA  300
QGTGASASST VFTSCSSSWT YSEPASSTHD ESTDHAAPSL KRMRRFEDLY LQPPNMQQIS  360
FQGQTVKKEP STQQQQQQQQ QQQEGSSTLV WPAAGLDQQG DAAVRISLNS LQSAAAGTDD  420
HQAKTSHDLQ ADSEADHAVR QMFSRWEENS AAAAHKSSTS VTAAAIGNAR RDSAGAH*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G79430.1	5e-18	G2-like family protein

Link Out ? help Back to Top
Phytozome	Sphfalx0326s0015.10.p