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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Sphfalx0294s0013.1.p |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
|
| Family |
LFY |
| Protein Properties |
Length: 376aa MW: 43216.3 Da PI: 8.5287 |
| Description |
LFY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Sphfalx0294s0013.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | FLO_LFY | 483.2 | 1.5e-147 | 17 | 373 | 41 | 385 |
FLO_LFY 41 aaaaarklreleelfkayGvryltvakiaelGftvstLvdmkdeelddlmkslseifrldllvGeryGikaavraerrrleeeeaekkr 129
+ + r++r+le+lf +yGvr t+aki+++Gftv+tL+ m+++eldd++++++e f+++ll GeryG+kaavrae++ +e+e e++r
Sphfalx0294s0013.1.p 17 TGMPRRETRTLEDLFDNYGVRHQTLAKISDMGFTVNTLIRMTEQELDDVIQTMVENFHIELLFGERYGLKAAVRAEKKAIEDEA-ERQR 104
445667799************************************************************************966.5555 PP
FLO_LFY 130 rkllsedeet.......aldalsqeglseepvqeekeaags...........................ggeglgeaelvaaeekkseee 184
+ +s+++e+ l al + g ++ + + ++ g++ lg+++l+ ++ +
Sphfalx0294s0013.1.p 105 TMSFSSKSEKkrrleggPLVALKEVGRMNDVRMN-----NNtlllpeslgqvgplnlntkepslllahGHNCLGAVGLLDLPDDD---- 184
5555333332121122233344444433333333.....2224444445555444333333333332222222222222222211.... PP
FLO_LFY 185 kkkaskkkqkrkkkkelkseededeeeeededeegsgedgeerqrehPfivtepgevargkknGLDYLfdLyeqCrefLlqvqkiaker 273
+++++++++ +++++ + ++ gedge+r+rehPfiv epg++ rgkknGLDYLfdLyeqC++fL q q+i+ke+
Sphfalx0294s0013.1.p 185 ------------PSSDNSEDQKVGKKKQKRRRMKELGEDGEDRPREHPFIVSEPGDIVRGKKNGLDYLFDLYEQCGKFLEQCQQISKEK 261
............1111122222233333344455699**************************************************** PP
FLO_LFY 274 GekcPtkvtnqvfryakkagasyinkPkmrhYvhCYalhcLdeeasnalrrafkergenvGawrqacykplvaiaarqgwdidavfnah 362
GekcP kvtnqvfryak +ga yinkPkmrhYvhCYalhcLd+e+sna+r+ +kergenvGawrqacy plv++a+ +gwdi+++fn++
Sphfalx0294s0013.1.p 262 GEKCPMKVTNQVFRYAKYTGAGYINKPKMRHYVHCYALHCLDTEQSNAIRKVYKERGENVGAWRQACYLPLVSMARANGWDIEGLFNRN 350
***************************************************************************************** PP
FLO_LFY 363 prLsiWYvPtkLrqLChlerska 385
+rL+iWYvPtkLrqLCh+er k+
Sphfalx0294s0013.1.p 351 ERLRIWYVPTKLRQLCHAERIKH 373
********************886 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 376 aa
Download sequence Send
to blast |
MNTMAQKDNP LAYEFFTGMP RRETRTLEDL FDNYGVRHQT LAKISDMGFT VNTLIRMTEQ 60
ELDDVIQTMV ENFHIELLFG ERYGLKAAVR AEKKAIEDEA ERQRTMSFSS KSEKKRRLEG 120
GPLVALKEVG RMNDVRMNNN TLLLPESLGQ VGPLNLNTKE PSLLLAHGHN CLGAVGLLDL 180
PDDDPSSDNS EDQKVGKKKQ KRRRMKELGE DGEDRPREHP FIVSEPGDIV RGKKNGLDYL 240
FDLYEQCGKF LEQCQQISKE KGEKCPMKVT NQVFRYAKYT GAGYINKPKM RHYVHCYALH 300
CLDTEQSNAI RKVYKERGEN VGAWRQACYL PLVSMARANG WDIEGLFNRN ERLRIWYVPT 360
KLRQLCHAER IKHGE*
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor. {ECO:0000250}. |
| Best hit in Arabidopsis thaliana ? help
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| Hit ID |
E-value |
Description |
| AT5G61850.1 | 2e-87 | floral meristem identity control protein LEAFY (LFY) |
