PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Sphfalx0291s0003.1.p

Organism

Sphagnum fallax

Taxonomic ID

53036

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum

Family

WRKY

Protein Properties

Length: 759aa MW: 83679 Da PI: 6.5405

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Sphfalx0291s0003.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	63.6	3.3e-20	411	468	3	59
-SS.-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 3 Dgy.nWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 Dg+ +W+KYG K ++++ f r+YY+C s++C++kk v+ ++edp+v+ + Y g+H+++ Sphfalx0291s0003.1.p 411 DGHqRWKKYGSKAIRNAYFCRAYYKCNSQDCSAKKIVQPTDEDPSVFRVSYMGTHTCS 468 66636***************************************************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:2.20.25.80	3.0E-20	401	469	IPR003657	WRKY domain
SuperFamily	SSF118290	2.35E-19	407	469	IPR003657	WRKY domain
SMART	SM00774	4.3E-21	409	469	IPR003657	WRKY domain
Pfam	PF03106	5.0E-18	410	467	IPR003657	WRKY domain
PROSITE profile	PS50811	15.686	415	465	IPR003657	WRKY domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 759 aa Download sequence Send to blast
MDFSGSLRRG KKRRTGEAAD YSWASEKIQE VSSRGIQDQG WHLRKILLSS TRPSSESQLQ 60 CAAGAADTGE LLELRQQQQQ QLDYPPVHNM NWSQQLAMQL AGRKILRRSL TAKLQNSQDR 120 CHALGLKQLQ TSPSLQATVP KSQEAAFNSP RYSKHDIEHK SSDEPASLDS LDMQHPSCSK 180 LMKLQHRRNL NSLRTPERTV PDSSLLTTSL FDEAAQAAFS SRSSMSCFVS NSRKTSSISR 240 LVDPSGDDLA GLDKSLNMLA SDLEPVTQGQ NFQRLKSALG ILDTDAAGCE LQANLNMDVA 300 AAHHNKTEQP IRAVASKASA LPQSSSSSNH MKMGVARGLR QEKNHNSKGK ITRPCSDLVN 360 ARPSRRNPIP VKRERESARR EESHEEVVQV LYQRLRPVVD HVVRKTRIPE DGHQRWKKYG 420 SKAIRNAYFC RAYYKCNSQD CSAKKIVQPT DEDPSVFRVS YMGTHTCSKN KHRSESAAPV 480 PERPVNATAA TAHADEVESR EAALDHLDHQ DQDHQYSSKL HTTAPAKVDQ AAARQVKEPK 540 TTLRAAAAAS SVRDEGDQVE NQLEPGLLIL SDRKADHASN AHLAAAPDGA STEDQVGVIE 600 EKTLDQLLLQ QQEATDFSAC SWSQSLAAGS CTAHTEEEEL TMISSDLDDF ADQALSATSD 660 ISSSCSRSEL AGQSRAPETA QHDMEIMINT SHASGRQNNI LLPAISMINF EEFDTQLDVD 720 RLLGQIEEAF SFQEPMFDHW ADDLLDISAF CSAGNNLL*

Sequence ? help Back to Top

Protein Sequence Length: 759 aa Download sequence Send to blast

MDFSGSLRRG KKRRTGEAAD YSWASEKIQE VSSRGIQDQG WHLRKILLSS TRPSSESQLQ  60
CAAGAADTGE LLELRQQQQQ QLDYPPVHNM NWSQQLAMQL AGRKILRRSL TAKLQNSQDR  120
CHALGLKQLQ TSPSLQATVP KSQEAAFNSP RYSKHDIEHK SSDEPASLDS LDMQHPSCSK  180
LMKLQHRRNL NSLRTPERTV PDSSLLTTSL FDEAAQAAFS SRSSMSCFVS NSRKTSSISR  240
LVDPSGDDLA GLDKSLNMLA SDLEPVTQGQ NFQRLKSALG ILDTDAAGCE LQANLNMDVA  300
AAHHNKTEQP IRAVASKASA LPQSSSSSNH MKMGVARGLR QEKNHNSKGK ITRPCSDLVN  360
ARPSRRNPIP VKRERESARR EESHEEVVQV LYQRLRPVVD HVVRKTRIPE DGHQRWKKYG  420
SKAIRNAYFC RAYYKCNSQD CSAKKIVQPT DEDPSVFRVS YMGTHTCSKN KHRSESAAPV  480
PERPVNATAA TAHADEVESR EAALDHLDHQ DQDHQYSSKL HTTAPAKVDQ AAARQVKEPK  540
TTLRAAAAAS SVRDEGDQVE NQLEPGLLIL SDRKADHASN AHLAAAPDGA STEDQVGVIE  600
EKTLDQLLLQ QQEATDFSAC SWSQSLAAGS CTAHTEEEEL TMISSDLDDF ADQALSATSD  660
ISSSCSRSEL AGQSRAPETA QHDMEIMINT SHASGRQNNI LLPAISMINF EEFDTQLDVD  720
RLLGQIEEAF SFQEPMFDHW ADDLLDISAF CSAGNNLL*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G40740.1	6e-16	WRKY DNA-binding protein 55

Link Out ? help Back to Top
Phytozome	Sphfalx0291s0003.1.p