PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Sphfalx0290s0009.2.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
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Family | BES1 | ||||||||
Protein Properties | Length: 495aa MW: 51052.7 Da PI: 7.6476 | ||||||||
Description | BES1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF822 | 166.2 | 2e-51 | 2 | 101 | 1 | 94 |
DUF822 1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpl......eeaeaag 83 ++++r ptwkErEnnkrRERrRRaiaaki+aGLR++Gnyklpk++DnneVlkALc+eAGw+v+++G+tyrkgskpl ++++++ Sphfalx0290s0009.2.p 2 TSGTRLPTWKERENNKRRERRRRAIAAKIFAGLRSYGNYKLPKHCDNNEVLKALCAEAGWIVDEEGNTYRKGSKPLlpssedQQMDVVS 90 5899***********************************************************************95443333333333 PP DUF822 84 ssasaspessl 94 s s+sp+ss+ Sphfalx0290s0009.2.p 91 PSPSVSPTSSS 101 34444444433 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF05687 | 2.2E-48 | 3 | 106 | IPR008540 | BES1/BZR1 plant transcription factor, N-terminal |
Sequence ? help Back to Top |
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Protein Sequence Length: 495 aa Download sequence Send to blast |
MTSGTRLPTW KERENNKRRE RRRRAIAAKI FAGLRSYGNY KLPKHCDNNE VLKALCAEAG 60 WIVDEEGNTY RKGSKPLLPS SEDQQMDVVS PSPSVSPTSS SYPGAVAAAG QHDGCTSLIP 120 WLKGLSSASA GPGAGGAAGS SSCAGTATTA SKSVSSSSAA SLPPFHTAMH VGCNHHHHHN 180 MNNSSSGISG GSAPVTPPLS SPTARGIPVK PDWDAIAKDG LPECPTHAFS KHVVNAVWSS 240 NPPVHPSSFL ASAAAGAASN LQSHHHHHLQ PASYCDTPDG CRTPADHEVE SDFSAATTTP 300 APLPLEFPHM ICRSTSFKWA NGVRVHTGPP GSALGLTSTS SGTKDSSGMS LGPRSFPAAT 360 TTTMTNAQSE TPALQTGPYC NAAWHGGGGS PAAPTTAPQA ATSTMPGPGM APARLLNLGP 420 GSSSRRADCK LHIDLEIIST DDVAQDCSLD HHHHDALAES KKVSVATKVP DELELTLGSS 480 RSSSSLQAPP PVSC* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5zd4_A | 4e-21 | 6 | 77 | 372 | 443 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_B | 4e-21 | 6 | 77 | 372 | 443 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_C | 4e-21 | 6 | 77 | 372 | 443 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_D | 4e-21 | 6 | 77 | 372 | 443 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
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Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_024357987.1 | 1e-60 | BES1/BZR1 homolog protein 4-like | ||||
TrEMBL | A0A2K1ITH7 | 3e-59 | A0A2K1ITH7_PHYPA; Uncharacterized protein | ||||
STRING | PP1S335_68V6.1 | 6e-58 | (Physcomitrella patens) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G18890.1 | 1e-23 | BES1/BZR1 homolog 3 |
Link Out ? help Back to Top | |
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Phytozome | Sphfalx0290s0009.2.p |