PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sphfalx0243s0014.1.p
Organism
Sphagnum fallax
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
Family ERF
Protein Properties Length: 476aa    MW: 52932.1 Da    PI: 7.6982
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sphfalx0243s0014.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP229.32.1e-09242289151
                   AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51 
                           s y GVr ++  + +++eIr p++   +k+++lg++ ta eAa+a++a + 
  Sphfalx0243s0014.1.p 242 SSYNGVRTRRGVKGFLVEIRPPKW---KKTIWLGTYNTAIEAAAAHDAGAF 289
                           5689**97777777*******987...7*******************9776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541711.5E-9242301IPR016177DNA-binding domain
SMARTSM003807.2E-5243307IPR001471AP2/ERF domain
PROSITE profilePS5103213.156243301IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.103.9E-15243301IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 476 aa     Download sequence    Send to blast
MPDQFESPCS NRRKQLRQFD QCSSTFSCPR CASNIRTCQF YSDTNSSGGA VLHQIDQGTL  60
SEDTYNSSRT RKLSQTTVAG DNIASKSEII VEFDCGKIGE EDAAAVSNTT STGRCSETNG  120
RVRVGTASAA EPKDVNEIPS NTSNEFHEGC TQAFRKVPSQ RSSLSMSRRR SRRESRMQHR  180
SYWSHLNVPV KIERDPSMEK AAPCSRVAAL RSGNEITRST TAYRRTSSRI IELERDHGSQ  240
TSSYNGVRTR RGVKGFLVEI RPPKWKKTIW LGTYNTAIEA AAAHDAGAFY TDKPKKKFNF  300
RNHGAMFSFP PLPPYISDHL RNNFDSSSSP QVMEDFKAFV KKQATLAASK TVQLRAAVKD  360
HAVLSPSVLA LPADSELAEP MNVTRDTAPE ECSSAVEIGP NCELSEFREV SPALPALTST  420
VLEMELELNS IGVHPQYHLP LDEYLIWNFQ DSWPPGMFQE FPTFTTTSLL QQEDL*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-