PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Sphfalx0240s0005.1.p

Organism

Sphagnum fallax

Taxonomic ID

53036

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum

Family

Dof

Protein Properties

Length: 473aa MW: 50224.2 Da PI: 7.6016

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Sphfalx0240s0005.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	124.8	2.7e-39	47	107	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 +++ ++cprC+s ntkfCyynnysl+qPr+fCk+CrryWt+GG+lrnvPvGgg+rknk+++ Sphfalx0240s0005.1.p 47 PDQLVACPRCQSLNTKFCYYNNYSLTQPRHFCKNCRRYWTAGGTLRNVPVGGGCRKNKRTK 107 67899*****************************************************986 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	4.0E-26	45	105	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	2.7E-33	49	105	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	29.236	51	105	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	53	89	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 473 aa Download sequence Send to blast
MLLMSGSSSN SYHGLQQQQQ LLQLQEKKAS ELFAQRALQA ERRLKPPDQL VACPRCQSLN 60 TKFCYYNNYS LTQPRHFCKN CRRYWTAGGT LRNVPVGGGC RKNKRTKHSS TTRLMSTDAA 120 AAAAAQQHSS AGNLILAAAA PHGSSGLDHQ SKSDSPGAAA IAGLQQQQHS PFVSTSTLFD 180 NNGHQAIAFE PSPGTCTATA ADHMHRESSE LPFGSSHTST TLCPPPHHHQ RPSHPQFESP 240 GIMNLGLFDS VLPDTGLSMH SSSSSSSSHI PQHQQHHISS STTGDGLSVF LDSSTYNRVG 300 ALAALSEGLN SNSSYNHHSS APVSSGGGDT GCETLQGTAR TTDGGGGAWR SNLPLPKQEP 360 LWVEAEDSFL HGSLDLNRLH AKGKFLTPAL FSHLPTHGLG EDVAAAAPGA AAWQQQNQQS 420 AASQKDNIVP HYDFAPDTNN FWSNNSNSSP WSQLDLHALH GLGGGGSSGR LL*

Sequence ? help Back to Top

Protein Sequence Length: 473 aa Download sequence Send to blast

MLLMSGSSSN SYHGLQQQQQ LLQLQEKKAS ELFAQRALQA ERRLKPPDQL VACPRCQSLN  60
TKFCYYNNYS LTQPRHFCKN CRRYWTAGGT LRNVPVGGGC RKNKRTKHSS TTRLMSTDAA  120
AAAAAQQHSS AGNLILAAAA PHGSSGLDHQ SKSDSPGAAA IAGLQQQQHS PFVSTSTLFD  180
NNGHQAIAFE PSPGTCTATA ADHMHRESSE LPFGSSHTST TLCPPPHHHQ RPSHPQFESP  240
GIMNLGLFDS VLPDTGLSMH SSSSSSSSHI PQHQQHHISS STTGDGLSVF LDSSTYNRVG  300
ALAALSEGLN SNSSYNHHSS APVSSGGGDT GCETLQGTAR TTDGGGGAWR SNLPLPKQEP  360
LWVEAEDSFL HGSLDLNRLH AKGKFLTPAL FSHLPTHGLG EDVAAAAPGA AAWQQQNQQS  420
AASQKDNIVP HYDFAPDTNN FWSNNSNSSP WSQLDLHALH GLGGGGSSGR LL*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60200.1	1e-34	TARGET OF MONOPTEROS 6

Link Out ? help Back to Top
Phytozome	Sphfalx0240s0005.1.p