PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Sphfalx0234s0029.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
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Family | C2H2 | ||||||||
Protein Properties | Length: 216aa MW: 24695.9 Da PI: 5.8886 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 12.8 | 0.00037 | 24 | 43 | 3 | 22 |
ETTTTEEESSHHHHHHHHHH CS zf-C2H2 3 CpdCgksFsrksnLkrHirt 22 C+ Cg sF + + +H+r+ Sphfalx0234s0029.1.p 24 CSTCGPSFEDMAKYSSHLRK 43 ******************96 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF02992 | 5.6E-13 | 1 | 66 | IPR004242 | Transposon, En/Spm-like |
PROSITE profile | PS50157 | 8.663 | 22 | 54 | IPR007087 | Zinc finger, C2H2 |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046872 | Molecular Function | metal ion binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 216 aa Download sequence Send to blast |
MWTMHDYPGF GFVSGLQTQG YKACSTCGPS FEDMAKYSSH LRKIVYLGHT KFLPLGHDMR 60 SDPLLFSSFD MPYGDDRDIP EATTFAYWRD VANRVIDLND SMVFEGSGLT RWGILNSLPY 120 WGELKIRHLL DPMHIEGNVG KAIIKQLYGE KDSNFREACE DFERHPDVWI TVDPNTGIEE 180 RPSAPWTLTT QERKDFRNRI GEMRFPTGLN FNGKG* |
Link Out ? help Back to Top | |
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Phytozome | Sphfalx0234s0029.1.p |