PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Sphfalx0226s0009.1.p

Organism

Sphagnum fallax

Taxonomic ID

53036

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum

Family

WRKY

Protein Properties

Length: 439aa MW: 48208 Da PI: 5.7917

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Sphfalx0226s0009.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	71.4	1.2e-22	93	150	3	59
-SS-.EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 3 Dgyn.WrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 Dg++ W+KYG K++++++f r+YY+C+ ++C++kk v+ ++edp+v+++tY+g+H+++ Sphfalx0226s0009.1.p 93 DGHRgWKKYGSKSIQNANFCRGYYKCSVKECNAKKSVQPTDEDPSVFQVTYTGTHTCS 150 67755***************************************************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:2.20.25.80	7.9E-23	87	150	IPR003657	WRKY domain
SMART	SM00774	3.8E-24	91	151	IPR003657	WRKY domain
SuperFamily	SSF118290	3.27E-20	92	150	IPR003657	WRKY domain
Pfam	PF03106	2.2E-20	93	149	IPR003657	WRKY domain
PROSITE profile	PS50811	16.157	98	152	IPR003657	WRKY domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 439 aa Download sequence Send to blast
MGTAETARAT ADDHSFRLQN NHAEDCTEAK FTDCDDDPIC GRPLTSGHNP SRAKRDREVD 60 VSNGASDDQK ALVVTYQRLR PGVDINKRGI PADGHRGWKK YGSKSIQNAN FCRGYYKCSV 120 KECNAKKSVQ PTDEDPSVFQ VTYTGTHTCS STYPRRKTHR IASMQPAATA VPAASAPQVL 180 QESQPMCSTP SRDIEAASAC QNEPKPASPA RVPSEYQDHG VGPETPEKLE YASSVVHLHA 240 LSTPVVTDAV KQKVLHQQAT SSSSLSELAV TAASTGHAAA NQQLTRSSDL ESCLAAESLM 300 STDSSMPPAA AAAAATGRSH DIQDWTITRY ALIDQEDQHE EGLRNVENMN IDSYCILNEL 360 QAAAYEDDDD RHHHHLHFAN NQLLHNNTDQ DFNNFQESCM LQEWRDLIMD HTKFSSSHEL 420 VPELLFPAAD HQLHHNLL*

Sequence ? help Back to Top

Protein Sequence Length: 439 aa Download sequence Send to blast

MGTAETARAT ADDHSFRLQN NHAEDCTEAK FTDCDDDPIC GRPLTSGHNP SRAKRDREVD  60
VSNGASDDQK ALVVTYQRLR PGVDINKRGI PADGHRGWKK YGSKSIQNAN FCRGYYKCSV  120
KECNAKKSVQ PTDEDPSVFQ VTYTGTHTCS STYPRRKTHR IASMQPAATA VPAASAPQVL  180
QESQPMCSTP SRDIEAASAC QNEPKPASPA RVPSEYQDHG VGPETPEKLE YASSVVHLHA  240
LSTPVVTDAV KQKVLHQQAT SSSSLSELAV TAASTGHAAA NQQLTRSSDL ESCLAAESLM  300
STDSSMPPAA AAAAATGRSH DIQDWTITRY ALIDQEDQHE EGLRNVENMN IDSYCILNEL  360
QAAAYEDDDD RHHHHLHFAN NQLLHNNTDQ DFNNFQESCM LQEWRDLIMD HTKFSSSHEL  420
VPELLFPAAD HQLHHNLL*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G11070.2	3e-15	WRKY family protein

Link Out ? help Back to Top
Phytozome	Sphfalx0226s0009.1.p