PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sphfalx0220s0017.1.p
Organism
Sphagnum fallax
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
Family STAT
Protein Properties Length: 804aa    MW: 87181.5 Da    PI: 6.6615
Description STAT family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sphfalx0220s0017.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1STAT194.11.4e-602523731121
                  STAT   1 ldvvllnalgqpvekdvevvasLlyadsglvveks.ddaeapLLisydGvefssedrplkllrGrasfklkisqLsskcdnrLfrikfe 88 
                           ldv ll+alg++++k++e+va L+yad+g++vek+ ddaeapLL+++dGvef+s++rp+kl++GrasfklkisqLsskcdnrLfr++f+
  Sphfalx0220s0017.1.p 252 LDVALLDALGRSIHKEMELVALLVYADTGVPVEKPkDDAEAPLLTTFDGVEFPSTERPIKLVHGRASFKLKISQLSSKCDNRLFRVCFD 340
                           89********************************999**************************************************** PP

                  STAT  89 ipklkkypfleavskpirCisrsrntrsssltk 121
                           +p+  +ypfl+a+s+pirC+sr+rn+r+  +++
  Sphfalx0220s0017.1.p 341 SPNTPEYPFLRAFSRPIRCVSRNRNHRTPPSVW 373
                           ***************************987666 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF498999.72E-642208IPR013320Concanavalin A-like lectin/glucanase domain
Gene3DG3DSA:3.30.505.101.2E-6690756IPR000980SH2 domain
SuperFamilySSF555505.39E-9694759IPR000980SH2 domain
PROSITE profilePS5000111.873697788IPR000980SH2 domain
Sequence ? help Back to Top
Protein Sequence    Length: 804 aa     Download sequence    Send to blast
MASKSGAKLG AIFGDDDYLP LEKMSVTLEK KGGSSGGGGG FEEDSFTLCF WVYLLKRNKA  60
GGGGGGGVLI RQGRADDMQR GVPFLSIDSD RKLTLHPLQP FSKNNAPAAA AEEGLLQEVV  120
KSDQACAMEK WVHFGCEISP GVARIHLNGG VVAEWKASSI SSIKEGRAAD LGPVVLSGGD  180
GSTDGDSVQG YAHYVRVLPQ PTVTNHYVKN PPLELSLDGS TGASEDHEVE EGGDGVWSVV  240
GGKASCRRNF ALDVALLDAL GRSIHKEMEL VALLVYADTG VPVEKPKDDA EAPLLTTFDG  300
VEFPSTERPI KLVHGRASFK LKISQLSSKC DNRLFRVCFD SPNTPEYPFL RAFSRPIRCV  360
SRNRNHRTPP SVWRQKPSVS VCPPEDHPVL LVGEAKIAGE VPHSNGYVHP GYIPLHGSPS  420
CLQGEPPLKR SRIAVEKVVN GSLLVDSSPH RVGALTDGGR ASPFSGSQFQ RPSASVSPSP  480
SPFTLSSDIH VSQGLLLSPL GASHSTEFTG VKQETDKDNT THLSAATAME VAHLSKANEA  540
DAAGFSDFLV YKYCLENMYC RAEFLKAAIL SKSDQDLSDF AGRVSFCTGC RHNGYQVLIA  600
RRLLSDGDDV WKSLSKDFYQ VSWLNLVKVL EEHFIQISGG KRQFSTKDKE FLQKVAGCGD  660
FASRKEFDRL WQWMYPVALA LSSPQLHSTW ECEDPKWIEG MISRDEAEDW LKSEGNAPQQ  720
GSFLLRFGSS RIWPHPDAGA LVVSYVGEDT HVHHKLLALD GITGSGEGEK LPLSEILLKQ  780
PELMHLLRKS IAPTKTQTSS GLH*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024357244.10.0SH2 domain-containing protein A-like
RefseqXP_024357246.10.0SH2 domain-containing protein A-like
TrEMBLA0A2K1IW190.0A0A2K1IW19_PHYPA; Uncharacterized protein
STRINGPP1S40_125V6.10.0(Physcomitrella patens)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G17040.15e-61SH2 domain protein A