PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Sphfalx0191s0003.1.p

Organism

Sphagnum fallax

Taxonomic ID

53036

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum

Family

G2-like

Protein Properties

Length: 706aa MW: 75385.6 Da PI: 5.4985

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Sphfalx0191s0003.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	103	1.9e-32	371	425	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+rlrWtpeLHe+Fv av+qLGG+++AtPk++l++m+v+g+t++hvkSHLQkYRl Sphfalx0191s0003.1.p 371 KTRLRWTPELHEKFVTAVSQLGGADRATPKAVLRVMGVQGITIYHVKSHLQKYRL 425 68****************************************************8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51294	11.55	368	428	IPR017930	Myb domain
SuperFamily	SSF46689	4.48E-17	370	425	IPR009057	Homeodomain-like
Gene3D	G3DSA:1.10.10.60	1.2E-30	371	426	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	8.2E-24	371	426	IPR006447	Myb domain, plants
Pfam	PF00249	6.9E-9	373	424	IPR001005	SANT/Myb domain
Pfam	PF14379	4.7E-21	457	502	IPR025756	MYB-CC type transcription factor, LHEQLE-containing domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 706 aa Download sequence Send to blast
MLTEGWQQPP QVPNSSHAAT PAVVTMPTPQ PPYPQPNMAK VQGGGRTGLP WAVEGGSSSS 60 SSASMQQRRG YYEPPPPHVG LPGISAMPSQ YQYASQGPDT ESSSPHVLQQ QQFATLPSYQ 120 SLPHWGPGVQ WPNQHQHPDG HLHPLPHPYP QQGADQWQAS SQQLPPSASD VHQPPQQPLV 180 RGSSGSHHPG AQLEKPSGGA GSYALQHTGR ESHQAFQDVN LGPAAQSGPV TLSPSPTSLA 240 IAPKTEDRDD ADLGDHLQVL LDSPDGDGTD SSQMGDQSMN EGFGTGAEWL KWTELDPEEE 300 TIANCWTELI DVESGEEQTL FQTTRFEPLA PSTLKLKDQP TDQQPSGPAG GQHPESPGPS 360 SATATAAAAV KTRLRWTPEL HEKFVTAVSQ LGGADRATPK AVLRVMGVQG ITIYHVKSHL 420 QKYRLAKYMP EISEEARAER RRNDTFLSPM GINSSHQITQ ALQMQMEVQK RLHEQLEIQR 480 ELQLRIEAQG KSLQKMIEQQ AKVGGVVLGY SSEPHDPSPS AIVPATEGPE TPGPLSKISI 540 SGSKGSLPAS IMESAISATN GAPLPVHIID QPDSNQSLLS APKAVSEEQP PPVLLALNVE 600 PSSKRARTDI EPQVSDSRQV PVSVASDAQR YGASAAEDNV QQAAVLEMPP DMVKQHLTCP 660 AAEAWAAADG QHTCSFVQCS PQQAHTACAQ PQPGSITQKP VRASG*

Sequence ? help Back to Top

Protein Sequence Length: 706 aa Download sequence Send to blast

MLTEGWQQPP QVPNSSHAAT PAVVTMPTPQ PPYPQPNMAK VQGGGRTGLP WAVEGGSSSS  60
SSASMQQRRG YYEPPPPHVG LPGISAMPSQ YQYASQGPDT ESSSPHVLQQ QQFATLPSYQ  120
SLPHWGPGVQ WPNQHQHPDG HLHPLPHPYP QQGADQWQAS SQQLPPSASD VHQPPQQPLV  180
RGSSGSHHPG AQLEKPSGGA GSYALQHTGR ESHQAFQDVN LGPAAQSGPV TLSPSPTSLA  240
IAPKTEDRDD ADLGDHLQVL LDSPDGDGTD SSQMGDQSMN EGFGTGAEWL KWTELDPEEE  300
TIANCWTELI DVESGEEQTL FQTTRFEPLA PSTLKLKDQP TDQQPSGPAG GQHPESPGPS  360
SATATAAAAV KTRLRWTPEL HEKFVTAVSQ LGGADRATPK AVLRVMGVQG ITIYHVKSHL  420
QKYRLAKYMP EISEEARAER RRNDTFLSPM GINSSHQITQ ALQMQMEVQK RLHEQLEIQR  480
ELQLRIEAQG KSLQKMIEQQ AKVGGVVLGY SSEPHDPSPS AIVPATEGPE TPGPLSKISI  540
SGSKGSLPAS IMESAISATN GAPLPVHIID QPDSNQSLLS APKAVSEEQP PPVLLALNVE  600
PSSKRARTDI EPQVSDSRQV PVSVASDAQR YGASAAEDNV QQAAVLEMPP DMVKQHLTCP  660
AAEAWAAADG QHTCSFVQCS PQQAHTACAQ PQPGSITQKP VRASG*

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
6j4k_A	2e-23	371	428	2	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B	2e-23	371	428	2	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A	2e-23	371	428	2	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C	2e-23	371	428	2	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D	2e-23	371	428	2	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F	2e-23	371	428	2	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H	2e-23	371	428	2	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J	2e-23	371	428	2	59	Protein PHOSPHATE STARVATION RESPONSE 1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G01060.1	6e-57	G2-like family protein

Link Out ? help Back to Top
Phytozome	Sphfalx0191s0003.1.p