PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sphfalx0175s0033.1.p
Organism
Sphagnum fallax
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
Family ERF
Protein Properties Length: 345aa    MW: 37470.8 Da    PI: 4.2124
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sphfalx0175s0033.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.24.8e-194696155
                   AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                          s y+GVr +  +g+Wv+eIr+p   +kr r++lg+f tae+Aa+a++aa  +l+g
  Sphfalx0175s0033.1.p 46 SPYRGVRMRQ-WGKWVSEIREP---NKRSRIWLGSFPTAEMAARAYDAAVVCLRG 96
                          68*****998.**********9...336*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541711.5E-2146105IPR016177DNA-binding domain
SMARTSM003809.4E-3847110IPR001471AP2/ERF domain
PROSITE profilePS5103223.03747104IPR001471AP2/ERF domain
PfamPF008473.1E-114896IPR001471AP2/ERF domain
CDDcd000189.53E-3248106No hitNo description
Gene3DG3DSA:3.30.730.102.0E-3148106IPR001471AP2/ERF domain
PRINTSPR003676.3E-104859IPR001471AP2/ERF domain
PRINTSPR003676.3E-107086IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 345 aa     Download sequence    Send to blast
MVEKQRTQAA ASWRAEAKLL GTRRVKKQGI SKHGVKTSPE PLSSSSPYRG VRMRQWGKWV  60
SEIREPNKRS RIWLGSFPTA EMAARAYDAA VVCLRGPSAP MNFPNSPSLA LPLCNSPKDI  120
QAAAAAAAAA EEQHCSGNLF SKPVAAVSLS AQLEDIDRLP ASSSPEPAES QASETTTSGE  180
EVCMFNTRSS DAVILPENSD LECTTEESAD SCPVEQKDVK DHQSVVKQQL DENMEFTGES  240
AAPAGTIIPV KAAAATGAVL VQQLDQDDSF PLEYSSMWDP GMAITDDLEE LPFLDLPPLF  300
DLEDTQQQEQ QQIFGFEADS AKLEFTDLWP DLMDSRDLDY ASLL*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A3e-16431101078Ethylene-responsive transcription factor ERF096
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024369554.15e-46ethylene-responsive transcription factor ERF022-like
TrEMBLA0A2K1KWV11e-44A0A2K1KWV1_PHYPA; Uncharacterized protein
STRINGPP1S55_256V6.12e-45(Physcomitrella patens)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44940.14e-30ERF family protein