PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Sphfalx0165s0026.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
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Family | Trihelix | ||||||||
Protein Properties | Length: 319aa MW: 36191.6 Da PI: 8.4231 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 48.6 | 2.1e-15 | 60 | 143 | 2 | 79 |
trihelix 2 WtkqevlaLiearremeerlrrgk......lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstc 79 Wt e+l+L ++rre+ +r+r+++ ++ +W+++ ++ ++ g+++s++qC++kwe l ++kk++++ek +++s + Sphfalx0165s0026.1.p 60 WTAAEILVLQAGRREDFDRIRKANlkerhkTAQERWKWIEDYGWSNGVHKSAQQCQDKWELLVSEFKKVNDHEKTIPGGQKSYW 143 *********************8643344438999****************************************9855555555 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50090 | 6.191 | 52 | 122 | IPR017877 | Myb-like domain |
Pfam | PF13837 | 9.2E-11 | 59 | 145 | No hit | No description |
Sequence ? help Back to Top |
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Protein Sequence Length: 319 aa Download sequence Send to blast |
MAELTVGPPS GLGHHHVISA PLGDEREHRN QTGSDIDVPF GDRSKKDAFR KGRSYKKGNW 60 TAAEILVLQA GRREDFDRIR KANLKERHKT AQERWKWIED YGWSNGVHKS AQQCQDKWEL 120 LVSEFKKVND HEKTIPGGQK SYWDMSKEER KKTAMPPNFY KEVYNALAEW YIKGRPADPG 180 ELDTSAPLHH TGASHRSLPT ASDAELSDSE DFDADGDPDV LMRKRKRKSS MFPLSEDMSL 240 ALILKKNNKK VIEAMLESED RKDKRHKEEM EMEEKKLEFE REKFRSTLQL GAGYIGALNS 300 IGDGVKQLGA ALTASSHT* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 222 | 227 | RKRKRK |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_024396482.1 | 1e-180 | trihelix transcription factor ASR3-like | ||||
Refseq | XP_024396483.1 | 1e-180 | trihelix transcription factor ASR3-like | ||||
TrEMBL | A9TNA0 | 1e-179 | A9TNA0_PHYPA; Predicted protein | ||||
STRING | PP1S271_34V6.1 | 1e-180 | (Physcomitrella patens) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G35640.1 | 7e-25 | Trihelix family protein |
Link Out ? help Back to Top | |
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Phytozome | Sphfalx0165s0026.1.p |