PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Sphfalx0158s0026.1.p

Organism

Sphagnum fallax

Taxonomic ID

53036

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum

Family

WRKY

Protein Properties

Length: 749aa MW: 81748.7 Da PI: 5.8558

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Sphfalx0158s0026.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	74.3	1.6e-23	464	521	3	59
-SS.-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 3 Dgy.nWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 Dg+ +W+KYG K +++++f+r+YY+C+ ++C++kk v+++++dp+v+e+tY+g+H+++ Sphfalx0158s0026.1.p 464 DGHrRWKKYGNKAIQNANFSRGYYKCSVKECNAKKMVQKTDKDPSVFEVTYTGTHTCS 521 55536***************************************************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:2.20.25.80	1.3E-23	459	521	IPR003657	WRKY domain
SMART	SM00774	2.8E-25	462	522	IPR003657	WRKY domain
SuperFamily	SSF118290	6.54E-21	462	521	IPR003657	WRKY domain
Pfam	PF03106	5.5E-21	464	520	IPR003657	WRKY domain
PROSITE profile	PS50811	17.442	468	523	IPR003657	WRKY domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 749 aa Download sequence Send to blast
MSCSFICSAS ACIEIMEAAS SIMDAGTRGC LSREGNMKRN YNTSGSAGHW DCKASVLVPD 60 HDGSAEKIQE MLSRAINDQQ QLWKILLSAS SSSSDQLAGS SSDQLGESVD GEQLDQAGIE 120 VAAGDTRRRQ QQQLVGITCT PEFNLPARLF RPLAAKLENS LDWCYLALCR IQDLTSQLIA 180 ARELPRSTSA LPIVNQQVSS VRPCCTGYSI LEHEEFHDQL RPSFHVRLHP NAVSKLKLYR 240 SSLSPLQIPG RTMDSSSLVD EASLSRSPTS LCLLNKSPKT ESTSLAAAPS DWAGDEAGRV 300 DESRITLASD LQGQNFDHGR ISAALGVMDH PADWPNLQAD SDMAIAATTD SKEPQQLMIP 360 RLQISSSKAV LLRSSSSNHL KMGQDAHDHL ISPQNNQGTI RRTDSLDGRS ITSTSTIRCN 420 PTREEKRDKE AVIDAEEDGN TSVVVVYQRL RPGVDRSLKG IPPDGHRRWK KYGNKAIQNA 480 NFSRGYYKCS VKECNAKKMV QKTDKDPSVF EVTYTGTHTC SSSMGCTSNY NPQYNKKQKT 540 GNSLNVQAPG AATAHDVPAA RKVFDHESPK HTTSDHHQAA AQLSTAPPVC SQELEQDQTS 600 PAAAASHEDR NNRYYASTKF PSIALDVCSA PSTEEDQAVV EEKVLHHQQE TANSSATAAA 660 SAACWSEFAR FEHAADQQFM SSSDLEAAIS TESSSSLDHA GRIKSEWKKF ALDQQQLDYA 720 ETVDMDSLYM LNLQDSAMSS WPELLPDN*

Sequence ? help Back to Top

Protein Sequence Length: 749 aa Download sequence Send to blast

MSCSFICSAS ACIEIMEAAS SIMDAGTRGC LSREGNMKRN YNTSGSAGHW DCKASVLVPD  60
HDGSAEKIQE MLSRAINDQQ QLWKILLSAS SSSSDQLAGS SSDQLGESVD GEQLDQAGIE  120
VAAGDTRRRQ QQQLVGITCT PEFNLPARLF RPLAAKLENS LDWCYLALCR IQDLTSQLIA  180
ARELPRSTSA LPIVNQQVSS VRPCCTGYSI LEHEEFHDQL RPSFHVRLHP NAVSKLKLYR  240
SSLSPLQIPG RTMDSSSLVD EASLSRSPTS LCLLNKSPKT ESTSLAAAPS DWAGDEAGRV  300
DESRITLASD LQGQNFDHGR ISAALGVMDH PADWPNLQAD SDMAIAATTD SKEPQQLMIP  360
RLQISSSKAV LLRSSSSNHL KMGQDAHDHL ISPQNNQGTI RRTDSLDGRS ITSTSTIRCN  420
PTREEKRDKE AVIDAEEDGN TSVVVVYQRL RPGVDRSLKG IPPDGHRRWK KYGNKAIQNA  480
NFSRGYYKCS VKECNAKKMV QKTDKDPSVF EVTYTGTHTC SSSMGCTSNY NPQYNKKQKT  540
GNSLNVQAPG AATAHDVPAA RKVFDHESPK HTTSDHHQAA AQLSTAPPVC SQELEQDQTS  600
PAAAASHEDR NNRYYASTKF PSIALDVCSA PSTEEDQAVV EEKVLHHQQE TANSSATAAA  660
SAACWSEFAR FEHAADQQFM SSSDLEAAIS TESSSSLDHA GRIKSEWKKF ALDQQQLDYA  720
ETVDMDSLYM LNLQDSAMSS WPELLPDN*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G11070.2	1e-17	WRKY family protein

Link Out ? help Back to Top
Phytozome	Sphfalx0158s0026.1.p