PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Sphfalx0130s0011.1.p

Organism

Sphagnum fallax

Taxonomic ID

53036

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum

Family

bZIP

Protein Properties

Length: 333aa MW: 36935.7 Da PI: 7.7211

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Sphfalx0130s0011.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	34.8	3.5e-11	48	87	4	43
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNk 43 +k+ rr+++NReAAr+sR+RKka++++Le +L + + Sphfalx0130s0011.1.p 48 SKALRRLAQNREAARKSRLRKKAYVQQLESSRIKLNQLEQ 87 7999*************************85555544433 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	4.6E-4	45	98	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	9.1E-8	46	94	No hit	No description
PROSITE profile	PS50217	9.174	47	91	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	5.06E-7	49	92	No hit	No description
Pfam	PF00170	7.6E-7	49	88	IPR004827	Basic-leucine zipper domain
PROSITE pattern	PS00036	0	52	67	IPR004827	Basic-leucine zipper domain
Pfam	PF14144	1.0E-33	132	207	IPR025422	Transcription factor TGA like domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0009410	Biological Process	response to xenobiotic stimulus
GO:0045892	Biological Process	negative regulation of transcription, DNA-templated
GO:0045893	Biological Process	positive regulation of transcription, DNA-templated
GO:0005634	Cellular Component	nucleus
GO:0005737	Cellular Component	cytoplasm
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 333 aa Download sequence Send to blast
MADNSPRTDT STDLEADAKV DNWLDDGHHG ATVVSNTSDH EATRNGDSKA LRRLAQNREA 60 ARKSRLRKKA YVQQLESSRI KLNQLEQELQ RARQQNPHSG GGTNGVNVTT LNPGAAAFDM 120 EYGRWVEEQH RQMCELRTAL HAHVADNELR LLVDGGMAHY DDIFRLKAVA AKADVFHLVS 180 GMWRTPAERC FMWMGGFRPS ELLKILIPQI EPLTEQQVLG ICNLQQSSQQ AEDALSQGME 240 ALQQSLADTV AGGLLGSSPN VANYMGQMAM AMGKLGTLET FVRQADSLRQ QTLQQMHRIL 300 TTRQAARGLL AMGDYFARLR ALSSLWSARP RE*

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional regulator involved in defense response. {ECO:0000250\|UniProtKB:Q7X993}.

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00492	DAP	Transfer from AT5G06950	Download

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	Retrieve

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_024379754.1	0.0	transcription factor TGA6-like isoform X2
Swissprot	Q6IVC3	1e-156	TGA22_ORYSJ; Transcription factor TGA2.2
TrEMBL	A0A2R6XAQ2	0.0	A0A2R6XAQ2_MARPO; Uncharacterized protein
STRING	PP1S30_324V6.4	1e-180	(Physcomitrella patens)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G12250.2	1e-135	TGACG motif-binding factor 6

Link Out ? help Back to Top
Phytozome	Sphfalx0130s0011.1.p

Publications ? help Back to Top
Chern M,Fitzgerald HA,Canlas PE,Navarre DA,Ronald PC Overexpression of a rice NPR1 homolog leads to constitutive activation of defense response and hypersensitivity to light. Mol. Plant Microbe Interact., 2005. 18(6): p. 511-20 [PMID:15986920] Chern M, et al. Interaction specificity and coexpression of rice NPR1 homologs 1 and 3 (NH1 and NH3), TGA transcription factors and Negative Regulator of Resistance (NRR) proteins. BMC Genomics, 2014. 15: p. 461 [PMID:24919709]