PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Sphfalx0110s0072.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
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Family | C2H2 | ||||||||
Protein Properties | Length: 442aa MW: 50741.4 Da PI: 7.9 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 11.5 | 0.00091 | 173 | 192 | 3 | 22 |
ETTTTEEESSHHHHHHHHHH CS zf-C2H2 3 CpdCgksFsrksnLkrHirt 22 C+ Cg sF + + +H+r+ Sphfalx0110s0072.1.p 173 CSTCGPSFEDMAKYSSHLRK 192 ******************96 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF02992 | 7.7E-59 | 11 | 214 | IPR004242 | Transposon, En/Spm-like |
PROSITE profile | PS50157 | 8.663 | 171 | 203 | IPR007087 | Zinc finger, C2H2 |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046872 | Molecular Function | metal ion binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 442 aa Download sequence Send to blast |
MYRCTDLAEL MVWHKEHRSE PGVMRLPVDS LAHKHVESTW PEFKRDPRHV RLGLASDGVS 60 PHSLGGKGRP TSVWPVVVMN YNLPPWLSMK KGFLLLSLII PGPSKVKNLD TYLALVVDEL 120 KTLWDGVWAY DGRKTTGGIP RVFKLRAICM WTMHDYPGFG FVSGLQTQGF KACSTCGPSF 180 EDMAKYSSHL RKIVYLGHTK FLPLGHDMRS DPLLFSSFDM PYGDDRDIPE ATTFAYWRDV 240 ANRVIDLNDS MVFEGSGLTR WGILNNLPYW GELKIRHLLD PMHIEGNVGK AIIKQLYGEK 300 DSNFNREACE DFERHPDVWI TVDPNISIEQ RPSTPWTLTT HERRDFRNRI GEMRFPTGYG 360 TNLQKAFGRD DDHKWPRYLK THDYHRLLQH ILPVAIMGLA SAEVQDALWS LGNLLRWVCS 420 KELFVEEIPR MRVIAAEVCI Y* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Link Out ? help Back to Top | |
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Phytozome | Sphfalx0110s0072.1.p |