PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Sphfalx0105s0061.1.p

Organism

Sphagnum fallax

Taxonomic ID

53036

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum

Family

C2H2

Protein Properties

Length: 542aa MW: 62440.9 Da PI: 7.7239

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Sphfalx0105s0061.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF02992	5.9E-57	1	202	IPR004242	Transposon, En/Spm-like
PROSITE profile	PS50157	8.663	161	193	IPR007087	Zinc finger, C2H2
Pfam	PF13960	9.9E-20	342	410	IPR025452	Domain of unknown function DUF4218

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046872	Molecular Function	metal ion binding

Sequence ? help Back to Top
Protein Sequence Length: 542 aa Download sequence Send to blast
MVWHKEHRSE PGVMRLPVDS PAHKHVESTW LEFKRDPRHV RLGLASDGVS PHSLGGKGRP 60 TSVWPVVVMN YNLPPWLSMK KGFLLLSLII PRPSKVKNLD TYLALVVDEL KTLWDGVWAY 120 DGRKTTGGIP RVFKLRAICM WTMHDYPGFG SVSGLQTQGY KACSTCGPSF EDMAKYSSHL 180 RKIVYLGHTK FLPLGHDMKS DPLLFSSFDM PYGDERDIPE ATTFAYWRDV ANRVIDLNDS 240 MVFKGSGLTR WGILNNLPYW GELKIRHLLD PMHIEGNVGK AIIKQLYGEK DSNFREACED 300 FERHPDVWIT VDPNTGIEQR PSAPWTLTTQ EKKDFRNRIG EMRFPIVHLV DEIAIAGPMH 360 CRWMYWLERY MAVLKGYVHN HARVEGSMAA GHLAAESMFY CTNILATIDP LCPHVWMEER 420 EEEEDRLTGA IKTRMLLPTE LIQLTTFMLN NSNVMEEWRN FYENAKSMSG RSRIFPTFHK 480 YMKEKLVEVD QLLAQGESIA CFPEITDDVH TMVHGPLRVV TTRSTMWTQG RHFRYSFFLF 540 H*

Sequence ? help Back to Top

Protein Sequence Length: 542 aa Download sequence Send to blast

MVWHKEHRSE PGVMRLPVDS PAHKHVESTW LEFKRDPRHV RLGLASDGVS PHSLGGKGRP  60
TSVWPVVVMN YNLPPWLSMK KGFLLLSLII PRPSKVKNLD TYLALVVDEL KTLWDGVWAY  120
DGRKTTGGIP RVFKLRAICM WTMHDYPGFG SVSGLQTQGY KACSTCGPSF EDMAKYSSHL  180
RKIVYLGHTK FLPLGHDMKS DPLLFSSFDM PYGDERDIPE ATTFAYWRDV ANRVIDLNDS  240
MVFKGSGLTR WGILNNLPYW GELKIRHLLD PMHIEGNVGK AIIKQLYGEK DSNFREACED  300
FERHPDVWIT VDPNTGIEQR PSAPWTLTTQ EKKDFRNRIG EMRFPIVHLV DEIAIAGPMH  360
CRWMYWLERY MAVLKGYVHN HARVEGSMAA GHLAAESMFY CTNILATIDP LCPHVWMEER  420
EEEEDRLTGA IKTRMLLPTE LIQLTTFMLN NSNVMEEWRN FYENAKSMSG RSRIFPTFHK  480
YMKEKLVEVD QLLAQGESIA CFPEITDDVH TMVHGPLRVV TTRSTMWTQG RHFRYSFFLF  540
H*

Link Out ? help Back to Top
Phytozome	Sphfalx0105s0061.1.p