PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sphfalx0100s0074.1.p
Organism
Sphagnum fallax
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
Family WRKY
Protein Properties Length: 853aa    MW: 91865.2 Da    PI: 7.3386
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sphfalx0100s0074.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY95.82.9e-30422481159
                           ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                  WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                           ++Dg++WrKYGqK+ kg+++pr+YYrCt a gCpv+k+v+r aed +++++tYeg+Hnh 
  Sphfalx0100s0074.1.p 422 MNDGCQWRKYGQKMAKGNPCPRAYYRCTVApGCPVRKQVQRLAEDMSILITTYEGSHNHA 481
                           58***************************99****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.4E-32407483IPR003657WRKY domain
SuperFamilySSF1182902.09E-27414483IPR003657WRKY domain
PROSITE profilePS5081128.518417483IPR003657WRKY domain
SMARTSM007742.3E-37422482IPR003657WRKY domain
PfamPF031061.2E-26423480IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 853 aa     Download sequence    Send to blast
MGRPAAVAAV ADGPQLMDAA TAGEWDNNMD TSQAPTKSTS SSGREDRVAY IDLSVKPSEE  60
ESEEEEMMET SASDYLSMIK GAVQRDSRLS SWKDEEASSP INPATDQKLH QLQPAAMTSS  120
QENVLHTGSQ ILGSRGSDVM SIDKLQLTSH SSLVHTNYNM SASETRSTVE DEMSPPLSPK  180
RSLRWTLQLQ NELMTVHTEM TRLREENKRL RLQLTQAGVT HNQNMQRVAP IDRTGDADSS  240
QDINLHTSSL PLRIFRSPTK EIKRPDLKSI ASITSPDHHA TVSPIKLGSA AQGMLSRSKQ  300
RQRESSPAAD EQVLVVHASQ DHIRTSTSSP TSHGHMRSEP TSFDPARDDE ITRDQSTSTD  360
HQQKEYSWPP KKLRKTAPTA HTSNQARIKP VQNPHRKDQE SHEPPVRKAR VSVRTRCEAP  420
TMNDGCQWRK YGQKMAKGNP CPRAYYRCTV APGCPVRKQV QRLAEDMSIL ITTYEGSHNH  480
AMPPAAAGMA STTAAAASML LAGSTTSSDD LVRMAAGGLP SFFTPAALPL QGACPTAPIS  540
SLTASSFPTI TLDLTKDPAT QLRLQSGIIA PASNAGPSSN HIETSRIAED HARNTPAQTF  600
LRDIIQPGAL FSLSNGTPDA YTLRTVSRSS SSNLQAASPT SSFQEQSYHH RQQQQAAVQQ  660
EMMARMASVG AAHASNQAGV GAAAVHTQPP ATASQSIADS VSAITADPMF MTALASAITS  720
ILSTTQTVQN HQQYHHAAAG AEADHQHAAG RATTIRRNQD DVLYAQAAAA ASVLMNREIT  780
ANSAIQTAPI QAGASMQQLA MQQLQGGSSP FMKSSILNSA FHHLSTMQQQ LQQDLPNQTH  840
VAAADHPAAT HP*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A3e-23409485176WRKY transcription factor 1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68150.13e-44WRKY DNA-binding protein 9