PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Sphfalx0094s0069.1.p

Organism

Sphagnum fallax

Taxonomic ID

53036

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum

Family

Dof

Protein Properties

Length: 430aa MW: 45377.6 Da PI: 5.5836

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Sphfalx0094s0069.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	116.3	1.2e-36	72	132	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 + k ++cprC+s+ntkfCy+nnys++qPryfC++C+ryWt GG+lrnvPvGgg+rk+ ++s Sphfalx0094s0069.1.p 72 PAKVVPCPRCESMNTKFCYFNNYSTKQPRYFCRQCQRYWTVGGTLRNVPVGGGSRKKSSRS 132 568899**************************************************98765 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF02701	1.1E-31	74	130	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	27.419	76	130	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	78	114	IPR003851	Zinc finger, Dof-type
ProDom	PD007478	1.0E-15	80	121	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 430 aa Download sequence Send to blast
MQLLVNSSSV VDGGGRAQTE EEEEDAEEQA GGVVAASSSS SPVSPAAARG QAAGGGVGSP 60 GSGSNVVVPE KPAKVVPCPR CESMNTKFCY FNNYSTKQPR YFCRQCQRYW TVGGTLRNVP 120 VGGGSRKKSS RSQRSDPYLR SATAAQSGGG GGGGGGGGVA PLSSTAAALS GNNNPLLLQH 180 TLGFQQLLMQ DVNLPYNMTT SAYELQQQEQ YLEHQNPGLL FYPVLNKSVN NNAQELSAMH 240 AMYPSSAGAG AGGVCGGGSD PGAQGGVNHH PMLNWVNLVP TEQQQQLQTE SIWNESRHQQ 300 SGSPALSASD EEEEVNRRRT SSSSCCNSPQ AKLQHVVKAE SFEPCTNNNN NSSSMLLQQQ 360 HLRILNTNNN RKSGFEGQCL APNNIGSSPP HGSSTIEEEG STPTNGYSTN GYEEGDVVSS 420 MWPDLEFFH*

Sequence ? help Back to Top

Protein Sequence Length: 430 aa Download sequence Send to blast

MQLLVNSSSV VDGGGRAQTE EEEEDAEEQA GGVVAASSSS SPVSPAAARG QAAGGGVGSP  60
GSGSNVVVPE KPAKVVPCPR CESMNTKFCY FNNYSTKQPR YFCRQCQRYW TVGGTLRNVP  120
VGGGSRKKSS RSQRSDPYLR SATAAQSGGG GGGGGGGGVA PLSSTAAALS GNNNPLLLQH  180
TLGFQQLLMQ DVNLPYNMTT SAYELQQQEQ YLEHQNPGLL FYPVLNKSVN NNAQELSAMH  240
AMYPSSAGAG AGGVCGGGSD PGAQGGVNHH PMLNWVNLVP TEQQQQLQTE SIWNESRHQQ  300
SGSPALSASD EEEEVNRRRT SSSSCCNSPQ AKLQHVVKAE SFEPCTNNNN NSSSMLLQQQ  360
HLRILNTNNN RKSGFEGQCL APNNIGSSPP HGSSTIEEEG STPTNGYSTN GYEEGDVVSS  420
MWPDLEFFH*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60200.1	1e-19	TARGET OF MONOPTEROS 6

Link Out ? help Back to Top
Phytozome	Sphfalx0094s0069.1.p