PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Sphfalx0087s0050.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
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Family | ERF | ||||||||
Protein Properties | Length: 94aa MW: 10561.1 Da PI: 9.9252 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 31.4 | 4.9e-10 | 4 | 49 | 1 | 51 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51 +++kG+r+++ +++ +eIr p g +k +slg++ t+eeAa a +a Sphfalx0087s0050.1.p 4 PCFKGIRQKE--NKYISEIRPP---GSKKIVSLGTYATEEEAALAFDAGIF 49 689***9755..8********8...435***************99998655 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF00847 | 1.4E-4 | 4 | 46 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 11.957 | 5 | 61 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 2.3E-7 | 5 | 67 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 1.5E-15 | 6 | 63 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 7.19E-12 | 6 | 63 | IPR016177 | DNA-binding domain |
CDD | cd00018 | 1.57E-14 | 6 | 63 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 94 aa Download sequence Send to blast |
GSPPCFKGIR QKENKYISEI RPPGSKKIVS LGTYATEEEA ALAFDAGIFY FRKYNIAYNF 60 PDSPEVLPPH EPRDVSVKFI KKAARRNAER ALAS |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_024367815.1 | 4e-17 | uncharacterized protein LOC112278487 | ||||
Refseq | XP_024367816.1 | 4e-17 | uncharacterized protein LOC112278487 | ||||
Refseq | XP_024367817.1 | 4e-17 | uncharacterized protein LOC112278487 | ||||
Refseq | XP_024367818.1 | 4e-17 | uncharacterized protein LOC112278487 | ||||
Refseq | XP_024367819.1 | 4e-17 | uncharacterized protein LOC112278487 | ||||
Refseq | XP_024367820.1 | 4e-17 | uncharacterized protein LOC112278487 | ||||
Refseq | XP_024367821.1 | 4e-17 | uncharacterized protein LOC112278487 | ||||
TrEMBL | A9RL52 | 1e-16 | A9RL52_PHYPA; Predicted protein | ||||
STRING | PP1S15_214V6.1 | 2e-17 | (Physcomitrella patens) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G19210.1 | 3e-16 | ERF family protein |
Link Out ? help Back to Top | |
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Phytozome | Sphfalx0087s0050.1.p |