PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sphfalx0083s0052.1.p
Organism
Sphagnum fallax
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
Family WRKY
Protein Properties Length: 480aa    MW: 51525.5 Da    PI: 5.034
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sphfalx0083s0052.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY95.44.1e-30166224259
                           --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                  WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                            D ++WrKYGqK++kgs++pr+YYrC+s+ gC ++k+vers++dp++++i Y+ eHnh+
  Sphfalx0083s0052.1.p 166 ADLWAWRKYGQKPIKGSPYPRGYYRCSSSkGCLARKQVERSHSDPSMLIISYSAEHNHP 224
                           599************************998****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.1E-30159226IPR003657WRKY domain
PROSITE profilePS5081133.201160226IPR003657WRKY domain
SuperFamilySSF1182901.28E-25162226IPR003657WRKY domain
SMARTSM007742.8E-35165225IPR003657WRKY domain
PfamPF031064.2E-25167224IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009555Biological Processpollen development
GO:0009793Biological Processembryo development ending in seed dormancy
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 480 aa     Download sequence    Send to blast
MKNKSSCCCT GAAGLQSSTN LKTNMISGNS SNYSSDSPMS IPHERPMGLR PTNPASSRSN  60
TITEQLHEYS EECNYVSQLS STKTTAAAAA ARHTSSCSSQ EQEQGAQEAQ EALSKTRVAT  120
TKLLSSAASS EPGDPKRRKI SQQKRTVLVS VVAGNGTRSS SEDVPADLWA WRKYGQKPIK  180
GSPYPRGYYR CSSSKGCLAR KQVERSHSDP SMLIISYSAE HNHPWPSHRN SLAGSTRVTS  240
SASKLAKGES AADQVACTRS SAATLEKQES SLSMITQLKS ESEEHEALIP CHDHSVEEEE  300
VPAQEEKENF ANGPSADEES KANPVVTVPS YKLQQQSAAI TSSGFSTTSV STHYGAAGFC  360
PPAAGFKQVE PVLNVQVSSG QVQIAVQSYA ESSCDDHVDM LDSLYSSSSI EPSMDEDFFT  420
ELEELIPDSS MATFGWSRQS CFFEDQSDDE GVVGSTAVVD PYNLFCWSTT SSVESKAVI*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5w3x_B1e-201662271780Disease resistance protein RRS1
5w3x_D1e-201662271780Disease resistance protein RRS1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34830.12e-46WRKY DNA-binding protein 35