PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Sphfalx0080s0051.1.p

Organism

Sphagnum fallax

Taxonomic ID

53036

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum

Family

Trihelix

Protein Properties

Length: 898aa MW: 101397 Da PI: 6.2922

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Sphfalx0080s0051.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	39.9	1.1e-12	103	177	1	70
trihelix 1 rWtkqevlaLiearr....emeerlrrgklk.kplWeevskkmrergferspkqCkekwenlnkrykkikegekk 70 +W ++e+l+Li+a+ + ++l+rg l+ + +W + ++++r+ g++rsp q k++w++l+ y ik+++++ Sphfalx0080s0051.1.p 103 KWNESETLTLIAATHaesqKHPNSLKRGGLNyQRKWVAMAERCRALGVQRSPHQLKKRWNSLHSNYVHIKQWQSR 177 7**********995444445555666655599************************************987 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50090	6.202	96	165	IPR017877	Myb-like domain
Pfam	PF13837	2.9E-11	102	180	No hit	No description
Pfam	PF07999	2.6E-4	559	656	IPR006518	Trypanosome RHS

Sequence ? help Back to Top
Protein Sequence Length: 898 aa Download sequence Send to blast
MEPPERTDAN TEDEKQKDAA IAEGTNFEDI SVDIRDTEDP KVDDRKLEDV KMEEDMKIDD 60 AKMDDELDDS PIEETTIGEE GADEIIRARS KERNGVKRTR NTKWNESETL TLIAATHAES 120 QKHPNSLKRG GLNYQRKWVA MAERCRALGV QRSPHQLKKR WNSLHSNYVH IKQWQSRPGT 180 ADFWAMDRKE RMNHKLPAYF DDVFYKALEH PSSVVLPIPV TSASKLGSKS VKPVVADSVE 240 QGTSAGDDAL DSSEDNGRST FPVITFPPPF SQPPPLPPLP SLPSLQLPLP LSLPQLQMPP 300 HFPALSRPPR APGPAPSSVG NGLAPIQPED LKSVWLETFL LGFSVDPKVI KALETEEVTV 360 KVLVDEGTEE GVYKLLRMVA EATGIKITVG QQARVWHAVR QWQDNKRKAQ ELEGPENLCI 420 FARGAVAKEQ QHGHFLKVAA DPLGNFVGPF LIWVRECYED LRRIINNHLR GSKYNRFIVL 480 GTEGTGKSLF GVFWVLQMAA QRVKVVWKIN QQHFLLDFAD SVNPRVISPC KVEDLANVFD 540 DPSAWYVIDA QQETSLHYRC KMLLVCSTKP SNYKEFQKNA RSLMLYMPVW TEVEIKTFLE 600 EFEVWRPEYG NMHVNLREQA LGNFSKLGGI PRYVLDNRKR TEGVALLNAA MNSLTKSSLL 660 PLLTGEYMET TSDKIVHIRV DDTQYETASF CYAAPSIQQE IGQKFVQLDK VEACTWLTNN 720 IDNTPIAHLW GHLFEHVAHS ILQEGGSFKR KRVTLDGNPM ECSNLELQQT LSQHTFHAAD 780 DLKALGDGTY CTRSPLTNFE SIDAVITPNR FFQMFKWTSN NSSQGYKVLV LQQLDTVLGR 840 AMYELHAVVP MQRYDETSFR RWINNGGGGG GHVNNLLQKF EQYVVGVELH DTRLLGI*

Sequence ? help Back to Top

Protein Sequence Length: 898 aa Download sequence Send to blast

MEPPERTDAN TEDEKQKDAA IAEGTNFEDI SVDIRDTEDP KVDDRKLEDV KMEEDMKIDD  60
AKMDDELDDS PIEETTIGEE GADEIIRARS KERNGVKRTR NTKWNESETL TLIAATHAES  120
QKHPNSLKRG GLNYQRKWVA MAERCRALGV QRSPHQLKKR WNSLHSNYVH IKQWQSRPGT  180
ADFWAMDRKE RMNHKLPAYF DDVFYKALEH PSSVVLPIPV TSASKLGSKS VKPVVADSVE  240
QGTSAGDDAL DSSEDNGRST FPVITFPPPF SQPPPLPPLP SLPSLQLPLP LSLPQLQMPP  300
HFPALSRPPR APGPAPSSVG NGLAPIQPED LKSVWLETFL LGFSVDPKVI KALETEEVTV  360
KVLVDEGTEE GVYKLLRMVA EATGIKITVG QQARVWHAVR QWQDNKRKAQ ELEGPENLCI  420
FARGAVAKEQ QHGHFLKVAA DPLGNFVGPF LIWVRECYED LRRIINNHLR GSKYNRFIVL  480
GTEGTGKSLF GVFWVLQMAA QRVKVVWKIN QQHFLLDFAD SVNPRVISPC KVEDLANVFD  540
DPSAWYVIDA QQETSLHYRC KMLLVCSTKP SNYKEFQKNA RSLMLYMPVW TEVEIKTFLE  600
EFEVWRPEYG NMHVNLREQA LGNFSKLGGI PRYVLDNRKR TEGVALLNAA MNSLTKSSLL  660
PLLTGEYMET TSDKIVHIRV DDTQYETASF CYAAPSIQQE IGQKFVQLDK VEACTWLTNN  720
IDNTPIAHLW GHLFEHVAHS ILQEGGSFKR KRVTLDGNPM ECSNLELQQT LSQHTFHAAD  780
DLKALGDGTY CTRSPLTNFE SIDAVITPNR FFQMFKWTSN NSSQGYKVLV LQQLDTVLGR  840
AMYELHAVVP MQRYDETSFR RWINNGGGGG GHVNNLLQKF EQYVVGVELH DTRLLGI*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33550.1	2e-15	Trihelix family protein

Link Out ? help Back to Top
Phytozome	Sphfalx0080s0051.1.p