PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Sphfalx0079s0087.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
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Family | C2H2 | ||||||||
Protein Properties | Length: 155aa MW: 17568.1 Da PI: 6.5054 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 13.4 | 0.00023 | 58 | 77 | 3 | 22 |
ETTTTEEESSHHHHHHHHHH CS zf-C2H2 3 CpdCgksFsrksnLkrHirt 22 C+ Cg sF + + +H+r+ Sphfalx0079s0087.1.p 58 CSTCGPSFEDMAKYSSHLRK 77 ******************96 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF02992 | 2.7E-21 | 1 | 100 | IPR004242 | Transposon, En/Spm-like |
PROSITE profile | PS50157 | 8.663 | 56 | 88 | IPR007087 | Zinc finger, C2H2 |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046872 | Molecular Function | metal ion binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 155 aa Download sequence Send to blast |
MVDELKTLWD GIWAYDGRKT TGGIPRVFKL RAICMWTMHD YPGFGFVSGL QTQGYKACST 60 CGPSFEDMAK YSSHLRKIVY LGHTKFLPLG HDMRSDPLLF SSFDMPYGDE RDIPEATTFA 120 YWRDVANRVI DLNDSMVFEG SGLTRWGILN SLPY* |
Link Out ? help Back to Top | |
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Phytozome | Sphfalx0079s0087.1.p |